Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0323X.Seq
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         29   0.084
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   7.3  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    22   9.6  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   9.6  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 29.1 bits (62), Expect = 0.084
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 479 PHRLHNRLVGIYYLPSQTQGRVQRVQPL 396
           PH  H  L G+   PSQ Q  +Q V PL
Sbjct: 163 PHHHHPGLTGLMQAPSQQQQHLQPVHPL 190


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 341 VAHMGTHRLPGPYSPTNPRAVGAVNDRVVRRPGIT*DLSDWQAEA 207
           V + G  R+P    P   + +G  +D VV  PG T + S   AEA
Sbjct: 658 VMYDGVLRIP---LPDEAKVIGYADDLVVLAPGRTPEESAAVAEA 699


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 323 HRLPGPYSPTNPRAVG 276
           HR P P+ PT  R +G
Sbjct: 37  HRAPRPWRPTRLRRLG 52


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 353 GAPAVAHMGTHRLPGPYSPTNPR 285
           G   V H+GTH    P  P  PR
Sbjct: 722 GMNLVVHIGTHADLPPVPPNFPR 744


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,375
Number of Sequences: 2352
Number of extensions: 9806
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)