Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0322.Seq
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 43 2e-04
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 35 0.080
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 35 0.080
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 33 0.19
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 33 0.19
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas... 29 5.3
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 29 5.3
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 500 KTKDNYQDSKIKAIYVHPDYKSPTKYNDVALLELEW-GINYSYFVQPACLWTKEDITELE 676
+T N Q ++ I+ +P YK + D+A+LE+ + GI ++ + QP CL +K+ +
Sbjct: 91 QTDGNEQIFYLQRIHFYPLYKDIFSH-DIAILEIPYPGIEFNEYAQPICLPSKDFVYTPG 149
Query: 677 SFATVTGWGVLQEGSRNISAELQAAVVDL 763
V+GWG + G R + LQAA++ +
Sbjct: 150 RQCVVSGWGSM--GLR-YAERLQAALIPI 175
Score = 36.3 bits (80), Expect = 0.026
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 270 VGGRDTFPGEFPHMGAVGWSPWDKNSDYVFKCGSSLISPFFLLTAAHCSE 419
VGG +T PG FP A+ + CG+S++ L+TAAHC E
Sbjct: 28 VGGFETVPGAFPWTAALR-----NKATKAHHCGASILDKTHLITAAHCFE 72
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 34.7 bits (76), Expect = 0.080
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +2
Query: 506 KDNYQDSKIKAIYVHPDYKSP-----TKYNDVALLELEWGINYSYFVQPACLWTKEDITE 670
KD ++ IK++Y+ Y +ND+A+ ELE I +S + PACL + I
Sbjct: 92 KDMFKPLAIKSLYIRKGYVGDGCIDRESFNDIAVFELEEPIEFSKDIFPACLPSAPKIPR 151
Query: 671 L-ESFATVTGWG 703
+ E+ + G+G
Sbjct: 152 IRETGYKLFGYG 163
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 34.7 bits (76), Expect = 0.080
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 527 KIKAIYVHPDYKS--PTKYNDVALLELEWGINYSYFVQPACLWTKEDITELESFATVTGW 700
++ A+ +HP Y P+ Y D A++ + +N S +P CL + + VTGW
Sbjct: 126 RVTAVSIHPWYNIGFPSSY-DFAIMRIHPPVNTSTTARPICLPSLPAVEN--RLCVVTGW 182
Query: 701 GVLQEGS 721
G EGS
Sbjct: 183 GSTIEGS 189
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 195 TNLEIKRNGANRH*RLHLSLNPDAAVGGRDTFPGEFPHMGAVGWSPWDKNSDYVFKCGSS 374
TN+E+ + + + +++L+ +GG ++ P +P W+ + +CG S
Sbjct: 35 TNVELAQTRSAQEPADYVTLD-HRLIGGSESSPHSWP------WTVQLLSRLGHHRCGGS 87
Query: 375 LISPFFLLTAAHC 413
LI P F+LTAAHC
Sbjct: 88 LIDPNFVLTAAHC 100
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +2
Query: 506 KDNYQDSKIKAIYVHPDYKSPT--KYNDVALLELEWGINYSYFVQPACLWTKEDITELES 679
K + +K++A+ V ++ S K +D A++E+E I++S V+P CL + ++ +S
Sbjct: 117 KSDVIHNKVRAVLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPICL-PRPNMYYTKS 175
Query: 680 FATVTGWG 703
A V GWG
Sbjct: 176 LA-VPGWG 182
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 348 DYVFKCGSSLISPFFLLTAAH 410
D V + G S+ISP+ ++TAAH
Sbjct: 37 DGVNRLGGSIISPYHIITAAH 57
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 506 KDNYQDS-KIKAIYVHPDYKSPTKYNDVALLELEWGINYSYFVQPACLWTKEDITELESF 682
K+N + S +K Y+H Y + T ND+ALL + ++ ++P CL +D L+ +
Sbjct: 98 KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCL-VHDDSKLLKQY 155
Query: 683 --ATVTGWGV 706
V G+G+
Sbjct: 156 KNGVVIGYGL 165
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 363 CGSSLISPFFLLTAAHCS 416
CG+++I F+L+TAAHC+
Sbjct: 66 CGATVIDDFWLVTAAHCA 83
>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoforma protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 620 SYFVQPACLWTKEDITELESFATVTGWGVLQEGSRNISAELQAAV 754
+YF +P W + +L+ F G+L G R++ ++A +
Sbjct: 126 NYFNRPIIAWGLVNAAQLDDFERFPNAGILSAGQRSLGVAIRAVL 170
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 620 SYFVQPACLWTKEDITELESFATVTGWGVLQEGSRNISAELQAAV 754
+YF +P W + +L+ F G+L G R++ ++A +
Sbjct: 126 NYFNRPIIAWGLVNAAQLDDFERFPNAGILSAGQRSLGVAIRAVL 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,226,433
Number of Sequences: 27780
Number of extensions: 460132
Number of successful extensions: 1209
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -