Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0320.Seq
(519 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ... 56 5e-07
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ... 48 1e-04
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 40 0.034
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 38 0.10
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n... 37 0.32
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t... 33 3.0
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:... 33 3.9
UniRef50_Q0RZL0 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 76
Score = 56.0 bits (129), Expect = 5e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +1
Query: 172 SWNYRGCWHQTCPPIVPR*NI*SVLIPIRGLVRVPYRYFSSLPPRAGSG*FARLLPSLDV 351
SWNYR CWHQT P++ + + PI R + + S PP+ SG +RLL +D+
Sbjct: 7 SWNYRSCWHQT-GPLLGFGTVEN-RTPIHSTKRHQWNW-SLPPPKVSSGKVSRLLLPVDI 63
Query: 352 VAVSQAPSP 378
VA+SQAPSP
Sbjct: 64 VAISQAPSP 72
>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
LRRG00114 - Rattus norvegicus (Rat)
Length = 223
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 331 LLPSLDVVAVSQAPSPESNPDSP 399
LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 39.9 bits (89), Expect = 0.034
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 261 PRKSPVSLFFVTTSPCREW 317
PRKSPV LFFVTTSP REW
Sbjct: 24 PRKSPVLLFFVTTSPGREW 42
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 38.3 bits (85), Expect = 0.10
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 352 VAVSQAPSPESNPDSPLPVTTMV 420
+A+SQAPSPESN +SPLPV M+
Sbjct: 372 LAISQAPSPESNSNSPLPVKAML 394
Score = 34.7 bits (76), Expect = 1.3
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +2
Query: 140 LTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRYEAS*ESRIVIFRHYL 301
LTATIL+Y RLALQL K+ + Y+ IVI HYL
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367
>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
Gallus gallus
Length = 103
Score = 36.7 bits (81), Expect = 0.32
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 253 IRGLVRVPYRYFSSLPPRAGSG 318
++GL RV Y YFSSLPPR GSG
Sbjct: 82 LQGLERVLYCYFSSLPPRVGSG 103
Score = 35.5 bits (78), Expect = 0.73
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = +2
Query: 134 SFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRYEAS*ESRIVIFRHYLPVPG 313
SFLTA L+Y RLALQ LVK FKV SF+ + E + + LP P
Sbjct: 42 SFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGL-ERVLYCYFSSLP-PR 99
Query: 314 VGN 322
VG+
Sbjct: 100 VGS 102
>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3 - Rattus norvegicus
Length = 750
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 289 SSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLP 405
+++P G G A P L + A S PSPE PD+PLP
Sbjct: 607 AAIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645
>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
Mucin-16 - Homo sapiens (Human)
Length = 22152
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 283 YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 426
+ ++ P S F+ + PS+ + + SPES P SPLPVT ++ +
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668
>UniRef50_Q0RZL0 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 124
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 237 KCTHSDTRPRKSPVSLFFVTTSPCREWV--ICAPAAFLGCGSRFSGSLSGIEP 389
+C PR +PV+ ++ P R W +C P F+ G L IEP
Sbjct: 6 RCPPGAAAPRGAPVAGVYMVPIPGRAWAECLCPPLHFVATTGSEEGDLMAIEP 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,124,368
Number of Sequences: 1657284
Number of extensions: 10320315
Number of successful extensions: 28887
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28868
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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