Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0320.Seq
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.043
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.043
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 145 RNNFSIRYWSWNYRGCWHQTC 207
           R+NF   +  WNY  CW   C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766



 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = +1

Query: 133  ELFNRNNFSIRYWSWNYRGCWHQTC 207
            +    NNF      W Y  CW   C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 7/19 (36%)
 Frame = +1

Query: 151  NFSIRYWSWNYRGCWHQTC 207
            NF      W Y  CW   C
Sbjct: 1511 NFDGLDLDWEYPKCWQVDC 1529



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 136  LFNRNNFSIRYW 171
            +F   NFSI YW
Sbjct: 1615 VFYNANFSINYW 1626



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 7/19 (36%)
 Frame = +1

Query: 151  NFSIRYWSWNYRGCWHQTC 207
            NF      W Y  CW   C
Sbjct: 2434 NFDGLDLDWEYPKCWQVDC 2452


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = +1

Query: 154 FSIRYWSWNYRGCWHQ 201
           +++ YW   Y   WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 459 HLKDASPVLDHAICKSYQIH 518
           +L D+SP L+ A C+ +  H
Sbjct: 63  NLCDSSPCLNGATCQDHTTH 82


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 444 VDKGRHLKDASPVLDHAICKS 506
           +D   H    SP +DH  C S
Sbjct: 1   MDSSDHFDRESPNIDHNSCSS 21


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +1

Query: 370 PSPESNPDSPLPVTTMVVAETTIEKLIKADI*KMRRRYLTMRSAKVTR 513
           P P     + L VT +VV    I    +    ++RR   T +S  VT+
Sbjct: 3   PRPRCKLRTVLIVTLLVVLLVHISSSERVTRRRLRRPLKTTQSVSVTK 50


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 411 NHGSRRNYHRKVD 449
           N G RRN+ +K+D
Sbjct: 434 NLGMRRNFRKKLD 446


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,029
Number of Sequences: 336
Number of extensions: 2487
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)