Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0319.Seq
(806 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P28331 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 92 1e-17
UniRef50_Q4T4V2 Cluster: Chromosome 3 SCAF9531, whole genome sho... 86 9e-16
UniRef50_Q5BXF5 Cluster: SJCHGC06641 protein; n=1; Schistosoma j... 77 5e-13
UniRef50_Q23KA9 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 69 1e-10
UniRef50_Q0V3E4 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 67 6e-10
UniRef50_A7DLV2 Cluster: NADH-quinone oxidoreductase, chain G; n... 66 1e-09
UniRef50_Q9FGI6 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 65 2e-09
UniRef50_Q43644 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 64 5e-09
UniRef50_A0EAY1 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 62 1e-08
UniRef50_A4U449 Cluster: NADH dehydrogenase (Ubiquinone) Fe-S pr... 62 2e-08
UniRef50_Q9A6Y0 Cluster: NADH-quinone oxidoreductase; n=9; Alpha... 60 5e-08
UniRef50_UPI00015B44B5 Cluster: PREDICTED: similar to NADH-ubiqu... 60 6e-08
UniRef50_Q6G394 Cluster: NADH-quinone oxidoreductase; n=25; Alph... 54 3e-06
UniRef50_Q5DUT3 Cluster: Putative NADH-ubiquinone oxidoreductase... 50 9e-05
UniRef50_Q1GTK5 Cluster: NADH-quinone oxidoreductase; n=9; Alpha... 47 6e-04
UniRef50_P29915 Cluster: NADH-quinone oxidoreductase chain 3; n=... 45 0.003
UniRef50_A6D5X2 Cluster: Putative formate dehydrogenase, alphasu... 43 0.010
UniRef50_Q60314 Cluster: Uncharacterized protein MJ0006; n=1; Me... 43 0.010
UniRef50_Q1PWG5 Cluster: Similar to molybdopterin oxidoreductase... 42 0.018
UniRef50_A1RWM0 Cluster: Formate dehydrogenase, alpha subunit; n... 42 0.018
UniRef50_Q3J834 Cluster: NADH-quinone oxidoreductase, chain G; n... 41 0.032
UniRef50_A0LDS1 Cluster: NADH-quinone oxidoreductase; n=1; Magne... 41 0.042
UniRef50_Q4JBU3 Cluster: Formate dehydrogenase alpha chain; n=2;... 41 0.042
UniRef50_Q82TU9 Cluster: NADH-quinone oxidoreductase; n=4; Betap... 40 0.056
UniRef50_Q5V639 Cluster: Formate dehydrogenase alpha subunit; n=... 40 0.074
UniRef50_Q1NVC7 Cluster: Molybdopterin oxidoreductase:Molydopter... 39 0.13
UniRef50_Q0PQE9 Cluster: NADH:quinone oxidoreductase chain G; n=... 39 0.13
UniRef50_Q0HRS3 Cluster: Formate dehydrogenase, alpha subunit; n... 39 0.13
UniRef50_A3QB33 Cluster: Formate dehydrogenase, alpha subunit; n... 39 0.13
UniRef50_P61159 Cluster: Formate dehydrogenase alpha chain; n=37... 39 0.17
UniRef50_Q835I7 Cluster: NAD-dependent formate dehydrogenase, al... 38 0.23
UniRef50_Q97CU9 Cluster: Formate ferredoxin oxidoreductase [FMOR... 38 0.23
UniRef50_A6GS81 Cluster: NADH-quinone oxidoreductase; n=1; Limno... 38 0.30
UniRef50_Q2FEI5 Cluster: Putative formate dehydrogenase SAUSA300... 38 0.30
UniRef50_Q1J3V9 Cluster: Molybdopterin oxidoreductase; n=1; Dein... 38 0.39
UniRef50_A7C0M5 Cluster: NADH dehydrogenase I chain G; n=1; Begg... 38 0.39
UniRef50_Q3AE47 Cluster: NAD-dependent formate dehydrogenase, al... 37 0.52
UniRef50_Q2LS98 Cluster: Formate dehydrogenase; n=1; Syntrophus ... 36 0.91
UniRef50_A6GJI2 Cluster: Putative formate dehydrogenase alpha su... 36 0.91
UniRef50_A7H9V6 Cluster: Ferredoxin; n=4; Cystobacterineae|Rep: ... 36 1.6
UniRef50_A7I6T0 Cluster: Molybdopterin oxidoreductase; n=1; Cand... 36 1.6
UniRef50_Q8EJV4 Cluster: Sensor histidine kinase, putative; n=11... 35 2.1
UniRef50_Q4GZE2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q4UK22 Cluster: NADH-quinone oxidoreductase subunit G; ... 35 2.1
UniRef50_A4BTQ8 Cluster: NADH-quinone oxidoreductase; n=3; Ectot... 35 2.8
UniRef50_Q4XW04 Cluster: Putative uncharacterized protein; n=2; ... 35 2.8
UniRef50_Q8U0R3 Cluster: Formate dehydrogenase alpha chain; n=4;... 35 2.8
UniRef50_UPI0000DAF93D Cluster: putative Myb2 protein; n=1; Camp... 34 4.8
UniRef50_Q83BR1 Cluster: NADH-quinone oxidoreductase; n=3; Coxie... 34 4.8
UniRef50_Q315X2 Cluster: Formate dehydrogenase, chain A; n=4; De... 34 4.8
UniRef50_Q0EZQ3 Cluster: NADH-quinone oxidoreductase; n=1; Marip... 34 4.8
UniRef50_Q9ZCF6 Cluster: NADH-quinone oxidoreductase subunit G; ... 34 4.8
UniRef50_Q608Y2 Cluster: NADH-quinone oxidoreductase; n=5; Bacte... 33 6.4
UniRef50_Q5P7E5 Cluster: Assimilatory nitrate reductase; n=1; Az... 33 6.4
UniRef50_Q4UWQ3 Cluster: Formate dehydrogenase related protein; ... 33 6.4
UniRef50_A5YJ47 Cluster: NADH dehydrogenase gamma subunit; n=1; ... 33 6.4
UniRef50_A5NSB5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q3S282 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 33 6.4
UniRef50_A0B7M9 Cluster: Formate dehydrogenase, alpha subunit; n... 33 6.4
UniRef50_Q8XXQ7 Cluster: NADH-quinone oxidoreductase; n=63; Prot... 33 8.5
UniRef50_Q9T9H5 Cluster: NADH dehydrogenase subunit 4L; n=1; Hal... 33 8.5
UniRef50_Q240T9 Cluster: Protein kinase domain containing protei... 33 8.5
>UniRef50_P28331 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor; n=111; cellular
organisms|Rep: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor - Homo sapiens (Human)
Length = 727
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGRAQQT +AV+P G AR+DWKIIR LSE+ G LPYD + R+ E++P LV
Sbjct: 595 TYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLV 654
Query: 216 AYGDVQDNNYF 248
Y D++ NYF
Sbjct: 655 RYDDIEGANYF 665
Score = 43.2 bits (97), Expect = 0.008
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 GRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGKLDVKLKQ 319
G P D+V E P +A L++ + Q+ L+ L
Sbjct: 631 GMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLT 690
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
++D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
>UniRef50_Q4T4V2 Cluster: Chromosome 3 SCAF9531, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF9531, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 86.2 bits (204), Expect = 9e-16
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSE---VVGERLPYDNQTRSTARMSEITP 206
TYVN EGR+Q T +AV+P G ARDDWKIIR +SE + G LPYD+ R++E++P
Sbjct: 323 TYVNTEGRSQHTRVAVTPPGMARDDWKIIRAISEASNLAGVTLPYDSLEEVRTRLAEVSP 382
Query: 207 XLVAYGDVQDNNYF 248
LV Y DV++ NYF
Sbjct: 383 NLVRYDDVEEANYF 396
Score = 39.9 bits (89), Expect = 0.074
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 122 SDAVGSGGRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGK 298
S+A G P +EV P +A LA+ + Q L+
Sbjct: 355 SEASNLAGVTLPYDSLEEVRTRLAEVSPNLVRYDDVEEANYFKQANELAKVVNQDLLATP 414
Query: 299 LDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQK 403
L ++D++MTD ISRAS TMAKC++A + K
Sbjct: 415 LVPPQLTIKDFYMTDSISRASQTMAKCVKAASEGK 449
>UniRef50_Q5BXF5 Cluster: SJCHGC06641 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06641 protein - Schistosoma
japonicum (Blood fluke)
Length = 253
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
Y N EGRAQQT LAV P G R+DWKI R +SEVVG LPYD+ + R+ +I P L+
Sbjct: 120 YANTEGRAQQTRLAVVPPGLGREDWKIFRAISEVVGVTLPYDDLNQIRYRIGQIAPGLLV 179
Query: 219 YGDVQD 236
+ VQ+
Sbjct: 180 FNTVQE 185
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +2
Query: 269 QSLQKSLSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
QS Q ++ + + L L+DY++TD ISRAS TMAKC++AV + +++
Sbjct: 203 QSTQMNIKESIKLSLLTLKDYYVTDCISRASQTMAKCVKAVQEHEKN 249
>UniRef50_Q23KA9 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial, putative; n=1; Tetrahymena
thermophila SB210|Rep: NADH-ubiquinone oxidoreductase 75
kDa subunit, mitochondrial, putative - Tetrahymena
thermophila SB210
Length = 771
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
T+VN EGR QQ L V P G AR+DW+IIR LSE G LPYD+ R++E+ P L+
Sbjct: 642 TWVNTEGRVQQGRLVVMPPGDAREDWQIIRALSEEAGVPLPYDSLEELRYRVAELAPHLL 701
Query: 216 AYGDVQ 233
Y ++
Sbjct: 702 KYDYIE 707
Score = 35.5 bits (78), Expect = 1.6
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQSPY 415
+++++MTD ISRAS TMAKC A +K S +
Sbjct: 735 IDNFYMTDAISRASVTMAKCSTAFNHEKFSNF 766
>UniRef50_Q0V3E4 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit; n=2; Ascomycota|Rep: NADH-ubiquinone
oxidoreductase 75 kDa subunit - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 692
Score = 66.9 bits (156), Expect = 6e-10
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +3
Query: 30 ALTYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPX 209
++TYVN EGR Q + AV G +R+DWKIIR SE G LPYD+ RM EI+P
Sbjct: 541 SVTYVNTEGRVQMSRAAVGLPGASREDWKIIRAASEYFGAELPYDDVEALRDRMEEISPA 600
Query: 210 LVAYGDVQ 233
L Y V+
Sbjct: 601 LRRYDLVE 608
Score = 33.1 bits (72), Expect = 8.5
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQSP 412
++++F TD ISR SPTMA+C A K +++P
Sbjct: 638 IKNFFFTDSISRNSPTMARCSAA--KAEKNP 666
>UniRef50_A7DLV2 Cluster: NADH-quinone oxidoreductase, chain G; n=4;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase,
chain G - Methylobacterium extorquens PA1
Length = 708
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGR Q A P G AR+DW I+R LS+V+G+RLPYD+ M P L
Sbjct: 584 TYVNLEGRVQMANRAGFPPGDAREDWAILRALSDVLGKRLPYDSLAALRKAMYAAHPHLA 643
Query: 216 AYGDVQDNN 242
A G V+ ++
Sbjct: 644 AVGQVEPSD 652
>UniRef50_Q9FGI6 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 748
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TY N EG QQT+ AV G ARDDWKI+R LSEV G +LPY++ +R+ + P LV
Sbjct: 629 TYENTEGFTQQTVPAVPTVGDARDDWKIVRALSEVSGVKLPYNSIEGVRSRIKSVAPNLV 688
>UniRef50_Q43644 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor; n=44; cellular
organisms|Rep: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor - Solanum tuberosum
(Potato)
Length = 738
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/74 (44%), Positives = 41/74 (55%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
Y N EG AQ TL AV G ARDDWKI+R LSEV G LPYD+ +R+ + P L+
Sbjct: 624 YENTEGCAQITLPAVPTVGDARDDWKIVRALSEVAGVGLPYDSLGAIRSRIKTVAPNLLE 683
Query: 219 YGDVQDNNYFAKRR 260
+ Q + R
Sbjct: 684 VDERQPATFSTSLR 697
>UniRef50_A0EAY1 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit; n=3; Paramecium tetraurelia|Rep:
NADH-ubiquinone oxidoreductase 75 kDa subunit -
Paramecium tetraurelia
Length = 712
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYV+ EGR Q T L P A+ DW+I+R LSE G LPYD RM+E+ P L+
Sbjct: 584 TYVSTEGRVQTTKLVALPPSGAKSDWEILRALSEECGCALPYDTLEEVRYRMAELAPHLL 643
Query: 216 AYGDVQDN 239
Y ++ +
Sbjct: 644 KYDYIESS 651
Score = 33.5 bits (73), Expect = 6.4
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 269 QSLQKSLSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQSPY 415
+S ++++S L + +++MTD ISR S TMAKC A K S +
Sbjct: 661 ESSKQTISATPFKDLIDVSNFYMTDAISRQSVTMAKCSTAFNPHKFSTF 709
>UniRef50_A4U449 Cluster: NADH dehydrogenase (Ubiquinone) Fe-S
protein 1, 75kDa isoform; n=1; Magnetospirillum
gryphiswaldense|Rep: NADH dehydrogenase (Ubiquinone)
Fe-S protein 1, 75kDa isoform - Magnetospirillum
gryphiswaldense
Length = 175
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGR Q+T LA+ P G+A++DWK+IR LS+ + + L +D + RM P
Sbjct: 49 TYVNTEGRVQRTRLAIFPPGEAKEDWKVIRALSDALDKPLAFDTVKQLRERMVASNPVFA 108
Query: 216 AYGDVQ 233
+ G V+
Sbjct: 109 SEGVVK 114
Score = 33.5 bits (73), Expect = 6.4
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 320 LEDYFMTDPISRASPTMAKC 379
+++++M DPISRAS TMA+C
Sbjct: 136 IDNFYMVDPISRASKTMAEC 155
>UniRef50_Q9A6Y0 Cluster: NADH-quinone oxidoreductase; n=9;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 686
Score = 60.5 bits (140), Expect = 5e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARM 191
YVN EGR Q AV P G+A++DW I+R LSEV+G +LPYD+ + A++
Sbjct: 563 YVNMEGRVQMGRRAVFPKGEAKEDWSILRALSEVLGHKLPYDSLDQLRAKL 613
>UniRef50_UPI00015B44B5 Cluster: PREDICTED: similar to
NADH-ubiquinone oxidoreductase, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to NADH-ubiquinone
oxidoreductase, partial - Nasonia vitripennis
Length = 92
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2
Query: 287 LSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQ 400
LS +D+K K L+ +FMTD ISRASPTMAKC+QAV+KQ
Sbjct: 52 LSDSIDIKQKTLDQFFMTDAISRASPTMAKCVQAVLKQ 89
Score = 33.5 bits (73), Expect = 6.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 138 VVGERLPYDNQTRSTARMSEITPXLVAYGDVQDNNYFAK 254
V G LPYD+ + R+ ++ P LV YGD++ ++ A+
Sbjct: 1 VAGHCLPYDDLFQVRQRIEDLAPHLVKYGDLEAASFCAQ 39
>UniRef50_Q6G394 Cluster: NADH-quinone oxidoreductase; n=25;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase -
Bartonella henselae (Rochalimaea henselae)
Length = 689
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
YVN EGR Q T A G+A++DW I+R LS+V+G++LP+++ + + P L A
Sbjct: 567 YVNTEGRVQMTNRAGFAPGEAKEDWAILRALSDVLGQKLPFNSLFQLRQSLFNDYPHLCA 626
Query: 219 YGDV 230
D+
Sbjct: 627 IDDI 630
>UniRef50_Q5DUT3 Cluster: Putative NADH-ubiquinone oxidoreductase 75
kDa subunit; n=1; Nyctotherus ovalis|Rep: Putative
NADH-ubiquinone oxidoreductase 75 kDa subunit -
Nyctotherus ovalis
Length = 701
Score = 49.6 bits (113), Expect = 9e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDN 167
Y+N EGRAQ A S G + DW +R LSE +G+ LPYD+
Sbjct: 572 YLNTEGRAQLAQKATSAQGNGKSDWMTLRALSEELGQTLPYDS 614
>UniRef50_Q1GTK5 Cluster: NADH-quinone oxidoreductase; n=9;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 670
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXL 212
T VN EGR Q++ AV G AR+DW I R L++ +G + +D+ A M P L
Sbjct: 550 TTVNTEGRVQRSEKAVFAPGDAREDWSIFRALADALGVNVGFDSFDECRAAMIAAVPAL 608
>UniRef50_P29915 Cluster: NADH-quinone oxidoreductase chain 3; n=25;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 3 - Paracoccus denitrificans
Length = 673
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
+VN EGR Q + A G+ +++W I+R LS +G P+D+ ++ E P L
Sbjct: 553 FVNTEGRPQLAMRANFAPGEGKENWAILRALSAELGATQPWDSLAGLRRKLVEAVPHLAQ 612
Query: 219 YGDVQDNNY 245
V N +
Sbjct: 613 IDQVPQNEW 621
>UniRef50_A6D5X2 Cluster: Putative formate dehydrogenase,
alphasubunit; n=1; Vibrio shilonii AK1|Rep: Putative
formate dehydrogenase, alphasubunit - Vibrio shilonii AK1
Length = 1371
Score = 42.7 bits (96), Expect = 0.010
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
+ N E R Q+ + AV G+A++DW+II+ ++ +G Y T ++++TP
Sbjct: 1140 FTNTERRVQRLVPAVQAPGEAKEDWRIIQEIANAMGSDWAYQTVQDITEEIADVTP 1195
>UniRef50_Q60314 Cluster: Uncharacterized protein MJ0006; n=1;
Methanocaldococcus jannaschii|Rep: Uncharacterized
protein MJ0006 - Methanococcus jannaschii
Length = 378
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDN 167
T++N + R Q+ AV+P G A DDW II++L+E +G L +++
Sbjct: 321 TFINTDKRIQKINKAVNPPGDAMDDWLIIKSLAEKLGSDLGFNS 364
>UniRef50_Q1PWG5 Cluster: Similar to molybdopterin oxidoreductase,
molybdopterin-containing subunit/ NuoG subunit of NADH
dehydrogenase I; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to molybdopterin
oxidoreductase, molybdopterin-containing subunit/ NuoG
subunit of NADH dehydrogenase I - Candidatus Kuenenia
stuttgartiensis
Length = 890
Score = 41.9 bits (94), Expect = 0.018
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
TY + Q+ AVSP G+++ DWKII +SE +G PY N T + + P
Sbjct: 674 TYTSMGLITQRLNKAVSPVGESKADWKIICDVSEKMGHAFPYANVTEIVDEIKKAAP 730
>UniRef50_A1RWM0 Cluster: Formate dehydrogenase, alpha subunit; n=2;
Archaea|Rep: Formate dehydrogenase, alpha subunit -
Thermofilum pendens (strain Hrk 5)
Length = 685
Score = 41.9 bits (94), Expect = 0.018
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG-ER-LPYDNQTRSTARMSEITP 206
++ N E R Q + AV P G+A+ DW II +++ +G ER PY TA ++++ P
Sbjct: 451 SFTNTERRVQWSFKAVEPPGEAKPDWVIITEIAKALGLERFFPYTRVEDITAEINKVVP 509
>UniRef50_Q3J834 Cluster: NADH-quinone oxidoreductase, chain G; n=2;
Gammaproteobacteria|Rep: NADH-quinone oxidoreductase,
chain G - Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848)
Length = 797
Score = 41.1 bits (92), Expect = 0.032
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVV 143
T+VNAEGR Q AV P G+AR WK++R L+ ++
Sbjct: 615 TFVNAEGRWQSFTGAVPPPGEARPAWKVLRVLANLL 650
>UniRef50_A0LDS1 Cluster: NADH-quinone oxidoreductase; n=1;
Magnetococcus sp. MC-1|Rep: NADH-quinone oxidoreductase
- Magnetococcus sp. (strain MC-1)
Length = 797
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPY 161
T NAEGRAQ+ V G+A++DW+++R LS+ L Y
Sbjct: 601 TVTNAEGRAQRMEAMVPAPGEAKEDWRVLRKLSDWFSTPLSY 642
>UniRef50_Q4JBU3 Cluster: Formate dehydrogenase alpha chain; n=2;
Archaea|Rep: Formate dehydrogenase alpha chain -
Sulfolobus acidocaldarius
Length = 976
Score = 40.7 bits (91), Expect = 0.042
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXL- 212
T+VN E R Q+ A+ P G+A+ DW+II+ ++ +G Y + + ++++ P
Sbjct: 701 TFVNTERRIQRFYKAMEPIGEAKADWEIIQMIANAMGANWNYKHPSDIMDEVAKLCPIFS 760
Query: 213 -VAYGDVQDNN 242
V Y ++ N
Sbjct: 761 GVTYAKLEGFN 771
>UniRef50_Q82TU9 Cluster: NADH-quinone oxidoreductase; n=4;
Betaproteobacteria|Rep: NADH-quinone oxidoreductase -
Nitrosomonas europaea
Length = 801
Score = 40.3 bits (90), Expect = 0.056
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG-ERLPYDNQTRSTARM 191
T+VN EGR Q V P G+AR WKI+R L ++ E YD+ + A +
Sbjct: 621 TFVNTEGRIQSFSGVVPPLGEARPAWKILRVLGNLLQLEGFDYDSSEQVRAEI 673
>UniRef50_Q5V639 Cluster: Formate dehydrogenase alpha subunit; n=4;
Halobacteriaceae|Rep: Formate dehydrogenase alpha subunit
- Haloarcula marismortui (Halobacterium marismortui)
Length = 1103
Score = 39.9 bits (89), Expect = 0.074
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
T+ N E R Q+ P GKAR DW+I + L+ +G YD+ M EI
Sbjct: 840 TFTNTERRIQRVRPTSEPPGKARQDWEITQALARRLGYDWDYDHPREV---MDEINSLAP 896
Query: 216 AYGDV 230
YG V
Sbjct: 897 IYGGV 901
>UniRef50_Q1NVC7 Cluster: Molybdopterin oxidoreductase:Molydopterin
dinucleotide-binding region precursor; n=4; delta
proteobacterium MLMS-1|Rep: Molybdopterin
oxidoreductase:Molydopterin dinucleotide-binding region
precursor - delta proteobacterium MLMS-1
Length = 539
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
T+ E R Q+ AV P G+A+ DW+I L++ +G ++ YD A + ++ P
Sbjct: 309 TFTCTERRVQRVRKAVEPPGEAKPDWQIFCELAKRMGYQMHYDTAEDIFAEIRQLLP 365
>UniRef50_Q0PQE9 Cluster: NADH:quinone oxidoreductase chain G; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep:
NADH:quinone oxidoreductase chain G - Endoriftia
persephone 'Hot96_1+Hot96_2'
Length = 149
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 9 IDLCPVGAL-----TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVV 143
I CPV A +YVNA G Q AV P G+AR WK++R L ++
Sbjct: 3 ISSCPVAAFAETAGSYVNAAGEWQSFRGAVKPQGEARPAWKVLRVLGNLL 52
>UniRef50_Q0HRS3 Cluster: Formate dehydrogenase, alpha subunit; n=24;
Gammaproteobacteria|Rep: Formate dehydrogenase, alpha
subunit - Shewanella sp. (strain MR-7)
Length = 1432
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
+ N E R Q+ A++ G+A DW+I++ ++ +G Y N+ ++E+TP
Sbjct: 1191 FTNTERRVQRLEQALASPGEALPDWQIVQAVANAMGANWDYANEEAIWREINELTP 1246
>UniRef50_A3QB33 Cluster: Formate dehydrogenase, alpha subunit; n=8;
Gammaproteobacteria|Rep: Formate dehydrogenase, alpha
subunit - Shewanella loihica (strain BAA-1088 / PV-4)
Length = 1410
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
+ N E R Q+ A+ G AR DW+II +++ +G Y+++ ++ +TP
Sbjct: 1171 FTNTERRVQRLQAAIDSPGLARRDWQIITDIAKALGADWHYEDEASIWQELTRVTP 1226
>UniRef50_P61159 Cluster: Formate dehydrogenase alpha chain; n=37;
cellular organisms|Rep: Formate dehydrogenase alpha
chain - Methanococcus jannaschii
Length = 673
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVV--GERLPYDNQTRSTARMSEITP 206
T+ N E R Q AV+P G+A +DW II+ L+E + G++ Y+ + ++TP
Sbjct: 441 TFTNTERRVQLIRKAVNPPGEALEDWIIIKKLAEKLGYGDKFNYNKVEDIFNEIRKVTP 499
>UniRef50_Q835I7 Cluster: NAD-dependent formate dehydrogenase, alpha
subunit; n=12; cellular organisms|Rep: NAD-dependent
formate dehydrogenase, alpha subunit - Enterococcus
faecalis (Streptococcus faecalis)
Length = 906
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
T+ N E R Q+ AV P G+AR+D++I + +G Y++ +S +TP
Sbjct: 676 TFTNTERRVQRVRKAVEPRGQAREDYEIFCEVMTRMGYPCAYESAKEIMEEISAVTP 732
>UniRef50_Q97CU9 Cluster: Formate ferredoxin oxidoreductase [FMOR]
alpha subunit; n=3; Thermoplasma|Rep: Formate ferredoxin
oxidoreductase [FMOR] alpha subunit - Thermoplasma
volcanium
Length = 669
Score = 38.3 bits (85), Expect = 0.23
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARM-SEITPXL 212
T+ N E R Q+ + SP G+A+ DW I LSE + RL + RS + +EIT +
Sbjct: 442 TFTNTERRVQRIVSVKSPPGEAKQDWWI---LSE-IAHRLVGTERYRSVEDVFNEITQAI 497
Query: 213 VAYGDVQDNNYFAKRRLWHRAFRNP 287
Y ++ + + + W +NP
Sbjct: 498 PNYSGIRYQDIYPTGKQWPVNEQNP 522
>UniRef50_A6GS81 Cluster: NADH-quinone oxidoreductase; n=1;
Limnobacter sp. MED105|Rep: NADH-quinone oxidoreductase
- Limnobacter sp. MED105
Length = 758
Score = 37.9 bits (84), Expect = 0.30
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG 146
T++N G AQ AV P G+ R WK++R L ++G
Sbjct: 573 TFINIAGMAQTFKAAVRPLGETRPGWKVLRVLGNLLG 609
>UniRef50_Q2FEI5 Cluster: Putative formate dehydrogenase
SAUSA300_2258; n=77; cellular organisms|Rep: Putative
formate dehydrogenase SAUSA300_2258 - Staphylococcus
aureus (strain USA300)
Length = 984
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
T+ N E R Q+ A+ P G ++ DWKI + ++ +G Y + + ++ +TP
Sbjct: 704 TFTNTERRIQRLYQALEPLGDSKPDWKIFQAIANRLGFDWNYKHPSEIMDEVARLTP 760
>UniRef50_Q1J3V9 Cluster: Molybdopterin oxidoreductase; n=1;
Deinococcus geothermalis DSM 11300|Rep: Molybdopterin
oxidoreductase - Deinococcus geothermalis (strain DSM
11300)
Length = 709
Score = 37.5 bits (83), Expect = 0.39
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG 146
T N EGR Q+ A++P AR+DW+I+ L+ +G
Sbjct: 459 TTTNLEGRVQRRRQAITPPAAAREDWRILCDLAAAIG 495
>UniRef50_A7C0M5 Cluster: NADH dehydrogenase I chain G; n=1;
Beggiatoa sp. PS|Rep: NADH dehydrogenase I chain G -
Beggiatoa sp. PS
Length = 388
Score = 37.5 bits (83), Expect = 0.39
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVV 143
TYVN EGR Q V P G+AR WKI+R ++
Sbjct: 211 TYVNGEGRWQSFSGVVMPQGEARPAWKILRVFGNLL 246
>UniRef50_Q3AE47 Cluster: NAD-dependent formate dehydrogenase, alpha
subunit, selenocysteine- containing; n=6; Bacteria|Rep:
NAD-dependent formate dehydrogenase, alpha subunit,
selenocysteine- containing - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 893
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
T+ N E R Q+ A+ G+A+ DW+II ++ +G + Y + M +TP
Sbjct: 666 TFTNTERRVQRVRKAIPCVGEAKPDWEIIALVATKMGYPMSYSSAEEIFDEMRTLTP 722
>UniRef50_Q2LS98 Cluster: Formate dehydrogenase; n=1; Syntrophus
aciditrophicus SB|Rep: Formate dehydrogenase -
Syntrophus aciditrophicus (strain SB)
Length = 536
Score = 36.3 bits (80), Expect = 0.91
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
T N E R Q V+P G+ARDDW II ++ +G Y + +TP
Sbjct: 306 TATNTERRVQPMHKVVAPWGEARDDWWIIMQIANRMGMNWNYGKAEDIFEEIRTVTP 362
>UniRef50_A6GJI2 Cluster: Putative formate dehydrogenase alpha
subunit; n=1; Plesiocystis pacifica SIR-1|Rep: Putative
formate dehydrogenase alpha subunit - Plesiocystis
pacifica SIR-1
Length = 541
Score = 36.3 bits (80), Expect = 0.91
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLP 158
+ N++ R Q+ AV+P G+A+ DW+I+ ++ VG +P
Sbjct: 306 FTNSDRRVQRVRKAVNPPGEAKADWEILCEVARAVGYPMP 345
>UniRef50_A7H9V6 Cluster: Ferredoxin; n=4; Cystobacterineae|Rep:
Ferredoxin - Anaeromyxobacter sp. Fw109-5
Length = 603
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGER 152
T+VN EGRAQ+ LA P G +R W + L +G R
Sbjct: 492 TFVNFEGRAQRFELAYYPRGDSRPHWLLASELGRALGLR 530
>UniRef50_A7I6T0 Cluster: Molybdopterin oxidoreductase; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Molybdopterin
oxidoreductase - Methanoregula boonei (strain 6A8)
Length = 621
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
T NAE R Q+ A+ P G A+ DW+I +++ +G + + + A +EI +
Sbjct: 413 TVTNAERRVQRVRKAIEPVGSAKADWEITSGIAKAMGHEKDFAFKD-AEAVFNEIAKAVP 471
Query: 216 AYGDV 230
+Y +
Sbjct: 472 SYAGI 476
>UniRef50_Q8EJV4 Cluster: Sensor histidine kinase, putative; n=11;
Shewanella|Rep: Sensor histidine kinase, putative -
Shewanella oneidensis
Length = 359
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 530 NDYVKISPSTAFIYLLSVIFFLDLVRLKIYS-WQLSLEFVFKICFLFCLIW 679
N +++ A++YL++++F+L + + YS WQ+ L + F++C W
Sbjct: 3 NTPLQLEQKLAWVYLINLVFYLIPLFITPYSSWQIILILAVLVPFIYCYFW 53
>UniRef50_Q4GZE2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 761
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 217 ATSXGVISLMRAVDLVWLSYGS-RSPTTSDSVRMIFQSSLAFPCGDTARSVCC 62
AT+ + +M LVW SYG+ + D+ ++ + SL FPCGD + +CC
Sbjct: 328 ATAVRSLLVMSLGRLVW-SYGADQQANVWDTTELLLRGSLQFPCGDLS-ELCC 378
>UniRef50_Q4UK22 Cluster: NADH-quinone oxidoreductase subunit G;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit G
- Rickettsia felis (Rickettsia azadi)
Length = 671
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSE 197
YVN EGR Q AV+P G A++D +II+ L+ + + DN R+++
Sbjct: 554 YVNLEGRPQIAEKAVAPVGVAKEDIEIIKELAGSLKIDIGMDNLQEVRVRLAK 606
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 326 DYFMTDPISRASPTMAKCIQAVIKQKQ 406
+Y+MTD IS+ S TMAKC++A K+ +
Sbjct: 642 NYYMTDVISKNSVTMAKCVEAKEKRNE 668
>UniRef50_A4BTQ8 Cluster: NADH-quinone oxidoreductase; n=3;
Ectothiorhodospiraceae|Rep: NADH-quinone oxidoreductase
- Nitrococcus mobilis Nb-231
Length = 798
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG 146
T+VNAEG Q P G+AR W+I+R L +G
Sbjct: 620 TFVNAEGLWQSFSGLTKPPGEARPAWRILRVLGNQLG 656
>UniRef50_Q4XW04 Cluster: Putative uncharacterized protein; n=2;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 530
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 563 FIYLLSVIFF-LDLVRLKIYSWQLSLEFVFKICFL 664
F+Y+ + FF L ++RL IY++ + F+F +CF+
Sbjct: 37 FLYIFHITFFILHVMRLSIYNYIFVMPFIFYVCFI 71
>UniRef50_Q8U0R3 Cluster: Formate dehydrogenase alpha chain; n=4;
Thermococcaceae|Rep: Formate dehydrogenase alpha chain -
Pyrococcus furiosus
Length = 667
Score = 34.7 bits (76), Expect = 2.8
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGER 152
+Y+N+E R Q + A P G+++ DW+I+ L+ +G R
Sbjct: 447 SYMNSERRIQWSHKACEPLGESKPDWEILTMLANALGLR 485
>UniRef50_UPI0000DAF93D Cluster: putative Myb2 protein; n=1;
Campylobacter concisus 13826|Rep: putative Myb2 protein
- Campylobacter concisus 13826
Length = 585
Score = 33.9 bits (74), Expect = 4.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG 146
Y NAE R Q ++P G AR DW I+ ++ +G
Sbjct: 286 YTNAERRVQHNEAVITPPGDARQDWWIVCEIARRLG 321
>UniRef50_Q83BR1 Cluster: NADH-quinone oxidoreductase; n=3; Coxiella
burnetii|Rep: NADH-quinone oxidoreductase - Coxiella
burnetii
Length = 787
Score = 33.9 bits (74), Expect = 4.8
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTL 131
TYVNAEGR Q A P A+ WK++R L
Sbjct: 602 TYVNAEGRWQWASAASVPEKDAQPAWKVLRVL 633
>UniRef50_Q315X2 Cluster: Formate dehydrogenase, chain A; n=4;
Deltaproteobacteria|Rep: Formate dehydrogenase, chain A
- Desulfovibrio desulfuricans (strain G20)
Length = 581
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITP 206
T+ + E R Q+ AV P G +R DW+I+ L +G Y + M +TP
Sbjct: 312 TFSSTERRVQRIRRAVPPAGGSRPDWQILSELLTRMGAGPEYGSPEEIFDEMRALTP 368
>UniRef50_Q0EZQ3 Cluster: NADH-quinone oxidoreductase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH-quinone
oxidoreductase - Mariprofundus ferrooxydans PV-1
Length = 785
Score = 33.9 bits (74), Expect = 4.8
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
T+VN EGR + + G+ R WK++ L +V+G +P + A + P L
Sbjct: 594 TFVNMEGRVRVATNPIRSLGQERPLWKVMMRLVQVMGGEVPVVSLDELRAAIVARVPELA 653
Query: 216 AYGDV--QDNNYFAKRR 260
QD A RR
Sbjct: 654 GAWSATEQDKLLLAPRR 670
>UniRef50_Q9ZCF6 Cluster: NADH-quinone oxidoreductase subunit G;
n=7; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit G - Rickettsia prowazekii
Length = 675
Score = 33.9 bits (74), Expect = 4.8
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 326 DYFMTDPISRASPTMAKCIQAVIKQKQ 406
+Y+MTD IS+ S TMAKC++A ++K+
Sbjct: 642 NYYMTDVISKNSVTMAKCVEAHEERKR 668
>UniRef50_Q608Y2 Cluster: NADH-quinone oxidoreductase; n=5;
Bacteria|Rep: NADH-quinone oxidoreductase -
Methylococcus capsulatus
Length = 929
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWK 116
T V++EGRAQ+ A+ P G +RD W+
Sbjct: 657 TLVSSEGRAQRFFAAMQPAGDSRDGWR 683
>UniRef50_Q5P7E5 Cluster: Assimilatory nitrate reductase; n=1;
Azoarcus sp. EbN1|Rep: Assimilatory nitrate reductase -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 938
Score = 33.5 bits (73), Expect = 6.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERL 155
T N+E R + A++P G+AR DW+I+ + +G R+
Sbjct: 455 TVTNSERRITRVHRALTPPGEARADWRIVCDFAHELGPRI 494
>UniRef50_Q4UWQ3 Cluster: Formate dehydrogenase related protein;
n=3; Gammaproteobacteria|Rep: Formate dehydrogenase
related protein - Xanthomonas campestris pv. campestris
(strain 8004)
Length = 990
Score = 33.5 bits (73), Expect = 6.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEI 200
T+VN E R Q+ P G++R DW+I+ L+ +G Y + ++ ++ I
Sbjct: 712 TFVNTERRIQRFHQVFPPLGQSRPDWQILTELAARMGHDWGYTHPSQIMDEVARI 766
>UniRef50_A5YJ47 Cluster: NADH dehydrogenase gamma subunit; n=1;
Gluconacetobacter diazotrophicus PAL5|Rep: NADH
dehydrogenase gamma subunit - Gluconacetobacter
diazotrophicus PAL5
Length = 272
Score = 33.5 bits (73), Expect = 6.4
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
T V+AEGRAQ+ L +SP + W+ R L+ VG + + A + P L
Sbjct: 2 TLVSAEGRAQRFLPVLSPDRPIQAAWRWARDLARAVGRDPGWADLDSIVAAIGTSCPALA 61
Query: 216 AYG 224
G
Sbjct: 62 GIG 64
>UniRef50_A5NSB5 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 451
Score = 33.5 bits (73), Expect = 6.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 137 FRQRPNDLPVVPGLPXRRHGEERLLRAALRVDV 39
F RP+ P+ PGLP R ER L AA+R V
Sbjct: 135 FLDRPDGAPLGPGLPPARDEAERALYAAIRAQV 167
>UniRef50_Q3S282 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit; n=1; Thalassiosira pseudonana|Rep:
NADH-ubiquinone oxidoreductase 75 kDa subunit -
Thalassiosira pseudonana (Marine diatom)
Length = 749
Score = 33.5 bits (73), Expect = 6.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTL 131
TY+N EG + V+ G+ + DW+IIR +
Sbjct: 604 TYINTEGTVNKVAKVVTSSGQTKSDWQIIRKI 635
>UniRef50_A0B7M9 Cluster: Formate dehydrogenase, alpha subunit; n=1;
Methanosaeta thermophila PT|Rep: Formate dehydrogenase,
alpha subunit - Methanosaeta thermophila (strain DSM
6194 / PT) (Methanothrixthermophila (strain DSM 6194 /
PT))
Length = 920
Score = 33.5 bits (73), Expect = 6.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTAR-MSEITPXL 212
T+ + E R Q ++P G AR DW I++ ++ +G R + STA M+EI+
Sbjct: 681 TFTSTERRVQMVRRILAPPGDARPDWWILQEIALRMGYRKGF--SFSSTAEIMNEISRVA 738
Query: 213 VAYGDV 230
YG +
Sbjct: 739 RIYGGI 744
>UniRef50_Q8XXQ7 Cluster: NADH-quinone oxidoreductase; n=63;
Proteobacteria|Rep: NADH-quinone oxidoreductase -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 783
Score = 33.1 bits (72), Expect = 8.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVG 146
TY+N EG Q V G +R WK++R L ++G
Sbjct: 596 TYINCEGLPQSFNGVVRSLGDSRPAWKVLRVLGNLLG 632
>UniRef50_Q9T9H5 Cluster: NADH dehydrogenase subunit 4L; n=1;
Halocynthia roretzi|Rep: NADH dehydrogenase subunit 4L -
Halocynthia roretzi (Sea squirt)
Length = 106
Score = 33.1 bits (72), Expect = 8.5
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +2
Query: 560 AFIYLLSVIFFLDLVRLKIYSWQLSLEFVFKICFLF-----CLIWFGNF 691
A ++ +F L L RL + + L LEF+F IC + CL WFG F
Sbjct: 2 AIVFFFFFVFVL-LFRLDLVVFLLYLEFMFLICLFYLVGWGCLDWFGLF 49
>UniRef50_Q240T9 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 1401
Score = 33.1 bits (72), Expect = 8.5
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -3
Query: 690 KFPNHIKQNKKQILNTNSNESCQE*IFNLTRSRKKITDNK*MKAVDGL 547
K HIK N ++N NSN S Q+ IF L S KKI K K +D +
Sbjct: 831 KHSEHIKSN---VINNNSNHSLQKQIFYLNESDKKIETIK--KIIDSV 873
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,835,610
Number of Sequences: 1657284
Number of extensions: 14217867
Number of successful extensions: 36687
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 35321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36678
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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