Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0319.Seq
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030833-1|AAH30833.1| 727|Homo sapiens NADH dehydrogenase (ubi... 92 2e-18
BC022368-1|AAH22368.1| 727|Homo sapiens NADH dehydrogenase (ubi... 92 2e-18
BC012068-1|AAH12068.1| 255|Homo sapiens NDUFS1 protein protein. 92 2e-18
AC007383-1|AAY15061.1| 727|Homo sapiens unknown protein. 92 2e-18
X61100-1|CAA43412.1| 727|Homo sapiens 75 kDa subunit NADH dehyd... 91 4e-18
BC035645-1|AAH35645.1| 1266|Homo sapiens Similar to RIKEN cDNA 3... 32 2.8
AY181243-1|AAO27355.1| 1178|Homo sapiens G protein-coupled recep... 32 2.8
AK098835-1|BAC05428.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.7
BC046240-1|AAH46240.1| 392|Homo sapiens CARM1 protein protein. 30 8.6
>BC030833-1|AAH30833.1| 727|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q
reductas protein.
Length = 727
Score = 92.3 bits (219), Expect = 2e-18
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGRAQQT +AV+P G AR+DWKIIR LSE+ G LPYD + R+ E++P LV
Sbjct: 595 TYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLV 654
Query: 216 AYGDVQDNNYF 248
Y D++ NYF
Sbjct: 655 RYDDIEGANYF 665
Score = 43.2 bits (97), Expect = 0.001
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 GRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGKLDVKLKQ 319
G P D+V E P +A L++ + Q+ L+ L
Sbjct: 631 GMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLT 690
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
++D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
>BC022368-1|AAH22368.1| 727|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q
reductas protein.
Length = 727
Score = 92.3 bits (219), Expect = 2e-18
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGRAQQT +AV+P G AR+DWKIIR LSE+ G LPYD + R+ E++P LV
Sbjct: 595 TYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLV 654
Query: 216 AYGDVQDNNYF 248
Y D++ NYF
Sbjct: 655 RYDDIEGANYF 665
Score = 43.2 bits (97), Expect = 0.001
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 GRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGKLDVKLKQ 319
G P D+V E P +A L++ + Q+ L+ L
Sbjct: 631 GMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLT 690
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
++D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
>BC012068-1|AAH12068.1| 255|Homo sapiens NDUFS1 protein protein.
Length = 255
Score = 92.3 bits (219), Expect = 2e-18
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGRAQQT +AV+P G AR+DWKIIR LSE+ G LPYD + R+ E++P LV
Sbjct: 123 TYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLV 182
Query: 216 AYGDVQDNNYF 248
Y D++ NYF
Sbjct: 183 RYDDIEGANYF 193
Score = 43.2 bits (97), Expect = 0.001
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 GRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGKLDVKLKQ 319
G P D+V E P +A L++ + Q+ L+ L
Sbjct: 159 GMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLT 218
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
++D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 219 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 248
>AC007383-1|AAY15061.1| 727|Homo sapiens unknown protein.
Length = 727
Score = 92.3 bits (219), Expect = 2e-18
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGRAQQT +AV+P G AR+DWKIIR LSE+ G LPYD + R+ E++P LV
Sbjct: 595 TYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLV 654
Query: 216 AYGDVQDNNYF 248
Y D++ NYF
Sbjct: 655 RYDDIEGANYF 665
Score = 43.2 bits (97), Expect = 0.001
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 GRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGKLDVKLKQ 319
G P D+V E P +A L++ + Q+ L+ L
Sbjct: 631 GMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLT 690
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
++D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
>X61100-1|CAA43412.1| 727|Homo sapiens 75 kDa subunit NADH
dehydrogenase precursor protein.
Length = 727
Score = 91.1 bits (216), Expect = 4e-18
Identities = 41/71 (57%), Positives = 50/71 (70%)
Frame = +3
Query: 36 TYVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLV 215
TYVN EGRAQQT +AV+P G AR+DWKIIR LSE+ G LPYD + R+ E +P LV
Sbjct: 595 TYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEFSPNLV 654
Query: 216 AYGDVQDNNYF 248
Y D++ NYF
Sbjct: 655 RYDDIEGANYF 665
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 GRAAPVRQPDEVHRAHERDHPXXXXXXXXXXXXXXXEATALAQSL-QKSLSGKLDVKLKQ 319
G P D+V E P +A L++ + Q+ L+ L
Sbjct: 631 GMTLPYDTLDQVRNRLEEFSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLT 690
Query: 320 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 409
L+D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 691 LKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
>BC035645-1|AAH35645.1| 1266|Homo sapiens Similar to RIKEN cDNA
3830613O22 gene protein.
Length = 1266
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 572 LLSVIFFLDLVRLKIYSWQLSLEFVFKICFLFCLIWFGNFQ*TSNS 709
++S I+ L+R+ + SW + + F I FL C+++ G T N+
Sbjct: 778 IVSYIYHHSLIRISLKSWHMLVNLCFHI-FLTCVVFVGGITQTRNA 822
>AY181243-1|AAO27355.1| 1178|Homo sapiens G protein-coupled receptor
125 protein.
Length = 1178
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 572 LLSVIFFLDLVRLKIYSWQLSLEFVFKICFLFCLIWFGNFQ*TSNS 709
++S I+ L+R+ + SW + + F I FL C+++ G T N+
Sbjct: 635 IVSYIYHHSLIRISLKSWHMLVNLCFHI-FLTCVVFVGGITQTRNA 679
>AK098835-1|BAC05428.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ25969 fis, clone CBR02250. ).
Length = 182
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 560 AFIYLLSVIFFLDLVRLKIYSWQLSLEFVFKICFLFCLIWF 682
+F+Y S+ L L L S L+L F + F FC ++F
Sbjct: 16 SFLYHESIFLLLFLFFLSFLSLSLALSFFLSLSFFFCFLFF 56
>BC046240-1|AAH46240.1| 392|Homo sapiens CARM1 protein protein.
Length = 392
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 199 ISLMRAVDLVWLSYGSRSPTTS-DSVRMIFQSSLAFPCGDTARSVC 65
++ + ++ VWLS P T VR +FQS L GDT C
Sbjct: 200 VAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTC 245
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,133,218
Number of Sequences: 237096
Number of extensions: 2071380
Number of successful extensions: 3872
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3872
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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