Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0319.Seq
(806 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011089-1|AAR82755.1| 770|Drosophila melanogaster RE66734p pro... 80 4e-15
AE014298-1159|AAN09230.1| 731|Drosophila melanogaster CG2286-PB... 80 4e-15
AE014298-1158|AAF46356.1| 731|Drosophila melanogaster CG2286-PA... 80 4e-15
Y09063-1|CAA70284.1| 653|Drosophila melanogaster 75kDa subunit ... 69 6e-12
AY074995-1|AAL75815.1| 514|Drosophila melanogaster NADH-ubiquin... 29 7.5
AY074994-1|AAL75814.1| 514|Drosophila melanogaster NADH-ubiquin... 29 7.5
>BT011089-1|AAR82755.1| 770|Drosophila melanogaster RE66734p
protein.
Length = 770
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
YVN EGR QQTL VSP G AR+DWKI+R LSEVVG+ LPYDN R+ ++ P L
Sbjct: 641 YVNTEGRPQQTLPGVSPPGMAREDWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTR 700
Query: 219 YGDVQ 233
G ++
Sbjct: 701 LGQLE 705
Score = 65.3 bits (152), Expect = 9e-11
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AQSLQKSLSG-KLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQ 406
A ++ KS+ G +D+KLK+L DYFMTD ISRASPTMAKCI AV KQ++
Sbjct: 713 AGTISKSIGGGAIDIKLKELRDYFMTDAISRASPTMAKCISAVNKQQR 760
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 NIIDLCPVGALT 38
N+IDLCPVGALT
Sbjct: 274 NVIDLCPVGALT 285
>AE014298-1159|AAN09230.1| 731|Drosophila melanogaster CG2286-PB,
isoform B protein.
Length = 731
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
YVN EGR QQTL VSP G AR+DWKI+R LSEVVG+ LPYDN R+ ++ P L
Sbjct: 602 YVNTEGRPQQTLPGVSPPGMAREDWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTR 661
Query: 219 YGDVQ 233
G ++
Sbjct: 662 LGQLE 666
Score = 65.3 bits (152), Expect = 9e-11
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AQSLQKSLSG-KLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQ 406
A ++ KS+ G +D+KLK+L DYFMTD ISRASPTMAKCI AV KQ++
Sbjct: 674 AGTISKSIGGGAIDIKLKELRDYFMTDAISRASPTMAKCISAVNKQQR 721
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 NIIDLCPVGALT 38
N+IDLCPVGALT
Sbjct: 235 NVIDLCPVGALT 246
>AE014298-1158|AAF46356.1| 731|Drosophila melanogaster CG2286-PA,
isoform A protein.
Length = 731
Score = 79.8 bits (188), Expect = 4e-15
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDNQTRSTARMSEITPXLVA 218
YVN EGR QQTL VSP G AR+DWKI+R LSEVVG+ LPYDN R+ ++ P L
Sbjct: 602 YVNTEGRPQQTLPGVSPPGMAREDWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTR 661
Query: 219 YGDVQ 233
G ++
Sbjct: 662 LGQLE 666
Score = 65.3 bits (152), Expect = 9e-11
Identities = 31/48 (64%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 AQSLQKSLSG-KLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQ 406
A ++ KS+ G +D+KLK+L DYFMTD ISRASPTMAKCI AV KQ++
Sbjct: 674 AGTISKSIGGGAIDIKLKELRDYFMTDAISRASPTMAKCISAVNKQQR 721
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 NIIDLCPVGALT 38
N+IDLCPVGALT
Sbjct: 235 NVIDLCPVGALT 246
>Y09063-1|CAA70284.1| 653|Drosophila melanogaster 75kDa subunit
NADH:biquinone reductaseprecursor protein.
Length = 653
Score = 69.3 bits (162), Expect = 6e-12
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3
Query: 39 YVNAEGRAQQTLLAVSPXGKARDDWKIIRTLSEVVGERLPYDN 167
YVN EGR Q TL VSP G AR+DWKI+R LSEVVG+ LPYDN
Sbjct: 602 YVNTEGRPQHTLPGVSPPGMAREDWKILRALSEVVGKPLPYDN 644
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 NIIDLCPVGALT 38
N+IDLCPVGALT
Sbjct: 235 NVIDLCPVGALT 246
>AY074995-1|AAL75815.1| 514|Drosophila melanogaster NADH-ubiquinone
reductase 75 kDasubunit precursor protein.
Length = 514
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 NIIDLCPVGALT 38
N+IDLCPVGALT
Sbjct: 235 NVIDLCPVGALT 246
>AY074994-1|AAL75814.1| 514|Drosophila melanogaster NADH-ubiquinone
reductase 75 kDasubunit precursor protein.
Length = 514
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 3 NIIDLCPVGALT 38
N+IDLCPVGALT
Sbjct: 235 NVIDLCPVGALT 246
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,446,872
Number of Sequences: 53049
Number of extensions: 637441
Number of successful extensions: 1252
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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