Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0317.Seq
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         30   2.2  
M97933-1|AAA28566.1|  569|Drosophila melanogaster germ cell-less...    28   8.9  
AY061319-1|AAL28867.1|  569|Drosophila melanogaster LD23660p pro...    28   8.9  
AE013599-707|AAF59048.1|  569|Drosophila melanogaster CG8411-PA ...    28   8.9  

>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -2

Query: 243  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 82
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K   D+ K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976


>M97933-1|AAA28566.1|  569|Drosophila melanogaster germ cell-less
           protein protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = -1

Query: 202 IVDSCSKLEQHSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFAIRHSA 23
           I+D C+++   +    + +  Y+  C++  +G K S F      +L+ Y +    +RH +
Sbjct: 154 IIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHIS 213

Query: 22  AQLL 11
            +L+
Sbjct: 214 IELM 217


>AY061319-1|AAL28867.1|  569|Drosophila melanogaster LD23660p
           protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = -1

Query: 202 IVDSCSKLEQHSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFAIRHSA 23
           I+D C+++   +    + +  Y+  C++  +G K S F      +L+ Y +    +RH +
Sbjct: 154 IIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHIS 213

Query: 22  AQLL 11
            +L+
Sbjct: 214 IELM 217


>AE013599-707|AAF59048.1|  569|Drosophila melanogaster CG8411-PA
           protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = -1

Query: 202 IVDSCSKLEQHSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFAIRHSA 23
           I+D C+++   +    + +  Y+  C++  +G K S F      +L+ Y +    +RH +
Sbjct: 154 IIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHIS 213

Query: 22  AQLL 11
            +L+
Sbjct: 214 IELM 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,058,572
Number of Sequences: 53049
Number of extensions: 524674
Number of successful extensions: 1211
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)