Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0315.Seq
         (838 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.74 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   9.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 389  SLQWVSLTSNLQQAFFDNLTGSVEKIFYHVEE 294
            +L WV++ +      +D  TG V  ++YH E+
Sbjct: 1581 NLDWVAVMTYDFHGQWDKQTGHVAPLYYHPED 1612



 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -3

Query: 386  LQWVSLTSNLQQAFFDNLTGSVEKIFYHVEE 294
            L W+++        +D +TG V  ++ H E+
Sbjct: 2007 LDWIAVMCYDYHGQWDKITGHVAPMYAHPED 2037


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 573 ISGYVR*ESNTSFGWSPVCGMFAR*PNIIS*SPESRLRGN 454
           ++ + R + ++S GWSP     A+ P+ I   PES  +G+
Sbjct: 73  LAHHCRFKFSSSVGWSPAGHEEAQSPHRIYMHPESPSKGS 112


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 260 AQRYSYKCESEVLPHGRIFFPP 325
           A+R +Y CE  +  HG+  + P
Sbjct: 59  AKRAAYDCEGVIRHHGQWNYSP 80


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 400 SSRYSKTYGTMRSH 441
           + RY +T GTM SH
Sbjct: 232 TGRYDETRGTMLSH 245


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 13/62 (20%), Positives = 24/62 (38%)
 Frame = +1

Query: 544 IRFSTDVTRDEVKALSALMTFKCACVDVPFGGAKAGIKINPKEYSEHELEKITRRFTLEL 723
           + F+   +R  + +     TFK      P  G   G  ++ +  +   LEK +    +  
Sbjct: 123 VHFAESQSRRILASAGINKTFKSTLTGTPVDGWLFGDNLSERMKTTRALEKTSEELKIPK 182

Query: 724 AK 729
           AK
Sbjct: 183 AK 184


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 377  PIEEKKKKVAGILK 418
            PIE+ KKKV+  LK
Sbjct: 1206 PIEDDKKKVSAELK 1219


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 377  PIEEKKKKVAGILK 418
            PIE+ KKKV+  LK
Sbjct: 1206 PIEDDKKKVSAELK 1219


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 708 TTSDLFQFMLGVFFGI 661
           T +D F+   G FFGI
Sbjct: 278 TAADFFEIDRGTFFGI 293


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 821 SSHKYRRSKTFLVRRTHVRRGTSTPGPMNPFLA 723
           S HKY+ +   +   T  RR  S P P   F+A
Sbjct: 148 SLHKYKPTVHLVRVGTEPRRVISFPFPETQFIA 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,909
Number of Sequences: 336
Number of extensions: 4836
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)