Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0312.Seq
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 161 6e-40
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 161 6e-40
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 161 6e-40
04_01_0042 + 473912-474058,474208-474349,474442-476264 160 1e-39
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 159 2e-39
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 149 2e-36
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 115 4e-26
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 101 9e-22
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 98 6e-21
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 98 6e-21
05_05_0152 + 22762994-22763326,22763857-22763989,22764281-227643... 29 4.2
02_05_0587 + 30162806-30163183,30163315-30163478,30163571-301636... 29 4.2
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 29 5.6
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510... 29 5.6
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 28 9.8
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 161 bits (391), Expect = 6e-40
Identities = 72/86 (83%), Positives = 85/86 (98%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 583
GQLEF+A+LFVP+RAPFDLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSE
Sbjct: 52 GQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSE 111
Query: 582 DLPLNISREMLQQNKILKVIRKNLVK 505
DLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 112 DLPLNISREMLQQNKILKVIRKNLVK 137
Score = 132 bits (319), Expect = 3e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = -3
Query: 508 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 329
KKC+ELF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K++ELLRYH++ SGDE SL
Sbjct: 137 KKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSL 196
Query: 328 KEYVSRMKENQKHIYYITGENRDQV 254
K+YV+RMKE Q IYYITGE++ V
Sbjct: 197 KDYVTRMKEGQSEIYYITGESKKAV 221
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = -2
Query: 335 LSQRVCIQDEGEPETYLLHHWRKQRPGANSSFVERVKKRGYEVVYMTEPIDEYVVQQMRE 156
L V EG+ E Y + K+ NS F+E++KK+GYEV+YM + IDEY V Q++E
Sbjct: 196 LKDYVTRMKEGQSEIYYITGESKKAV-ENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKE 254
Query: 155 YDGKTLVSVTXXXXXXXXXXXXXXXXXXXXXXXEGLCKVMKNILDNKVEKV 3
++GK LVS T EGLCKV+K +L +KVEKV
Sbjct: 255 FEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKV 305
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 161 bits (391), Expect = 6e-40
Identities = 72/86 (83%), Positives = 85/86 (98%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 583
GQLEF+A+LFVP+RAPFDLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSE
Sbjct: 306 GQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSE 365
Query: 582 DLPLNISREMLQQNKILKVIRKNLVK 505
DLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 366 DLPLNISREMLQQNKILKVIRKNLVK 391
Score = 132 bits (319), Expect = 3e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = -3
Query: 508 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 329
KKC+ELF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K++ELLRYH++ SGDE SL
Sbjct: 391 KKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSL 450
Query: 328 KEYVSRMKENQKHIYYITGENRDQV 254
K+YV+RMKE Q IYYITGE++ V
Sbjct: 451 KDYVTRMKEGQSEIYYITGESKKAV 475
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = -2
Query: 335 LSQRVCIQDEGEPETYLLHHWRKQRPGANSSFVERVKKRGYEVVYMTEPIDEYVVQQMRE 156
L V EG+ E Y + K+ NS F+E++KK+GYEV+YM + IDEY V Q++E
Sbjct: 450 LKDYVTRMKEGQSEIYYITGESKKAV-ENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKE 508
Query: 155 YDGKTLVSVTXXXXXXXXXXXXXXXXXXXXXXXEGLCKVMKNILDNKVEKV 3
++GK LVS T EGLCKV+K +L +KVEKV
Sbjct: 509 FEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKV 559
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 161 bits (391), Expect = 6e-40
Identities = 72/86 (83%), Positives = 85/86 (98%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 583
GQLEF+A+LFVP+RAPFDLF+ +K++NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSE
Sbjct: 306 GQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSE 365
Query: 582 DLPLNISREMLQQNKILKVIRKNLVK 505
DLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 366 DLPLNISREMLQQNKILKVIRKNLVK 391
Score = 132 bits (319), Expect = 3e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = -3
Query: 508 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 329
KKC+ELF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K++ELLRYH++ SGDE SL
Sbjct: 391 KKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSL 450
Query: 328 KEYVSRMKENQKHIYYITGENRDQV 254
K+YV+RMKE Q IYYITGE++ V
Sbjct: 451 KDYVTRMKEGQSEIYYITGESKKAV 475
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = -2
Query: 335 LSQRVCIQDEGEPETYLLHHWRKQRPGANSSFVERVKKRGYEVVYMTEPIDEYVVQQMRE 156
L V EG+ E Y + K+ NS F+E++KK+GYEV+YM + IDEY V Q++E
Sbjct: 450 LKDYVTRMKEGQSEIYYITGESKKAV-ENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKE 508
Query: 155 YDGKTLVSVTXXXXXXXXXXXXXXXXXXXXXXXEGLCKVMKNILDNKVEKV 3
++GK LVS T EGLCKV+K +L +KVEKV
Sbjct: 509 FEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKV 559
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 160 bits (389), Expect = 1e-39
Identities = 73/86 (84%), Positives = 83/86 (96%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 583
GQLEF+A+LFVPRRAPFDLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L F++GVVDS+
Sbjct: 311 GQLEFKAILFVPRRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGFVKGVVDSD 370
Query: 582 DLPLNISREMLQQNKILKVIRKNLVK 505
DLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 371 DLPLNISREMLQQNKILKVIRKNLVK 396
Score = 133 bits (321), Expect = 2e-31
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = -3
Query: 508 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 329
KKC+E+F E+A++KE+Y K+YE FSKNLKLGIHEDSQNR KL++LLRYH++ SG+E SL
Sbjct: 396 KKCIEMFFEIADNKEDYAKFYEAFSKNLKLGIHEDSQNRGKLADLLRYHSTKSGNELTSL 455
Query: 328 KEYVSRMKENQKHIYYITGENRDQV 254
K+YV+RMKE QK +YYITGE+R V
Sbjct: 456 KDYVTRMKEGQKEVYYITGESRKAV 480
Score = 74.1 bits (174), Expect = 1e-13
Identities = 43/111 (38%), Positives = 60/111 (54%)
Frame = -2
Query: 335 LSQRVCIQDEGEPETYLLHHWRKQRPGANSSFVERVKKRGYEVVYMTEPIDEYVVQQMRE 156
L V EG+ E Y + ++ NS F+E++KK+GYEV++M + IDEY V Q++E
Sbjct: 455 LKDYVTRMKEGQKEVYYITG-ESRKAVENSPFLEKLKKKGYEVLFMVDAIDEYAVGQLKE 513
Query: 155 YDGKTLVSVTXXXXXXXXXXXXXXXXXXXXXXXEGLCKVMKNILDNKVEKV 3
YDGK LVS T LCKV+K+IL ++VEKV
Sbjct: 514 YDGKKLVSATKEGLKLDDDDDAKERKRSFEP----LCKVIKDILGDRVEKV 560
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 159 bits (387), Expect = 2e-39
Identities = 72/86 (83%), Positives = 84/86 (97%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 583
GQLEF+A+LFVP+RAPFDLF+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F++G+VDSE
Sbjct: 306 GQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSE 365
Query: 582 DLPLNISREMLQQNKILKVIRKNLVK 505
DLPLNISREMLQQNKILKVIRKNLVK
Sbjct: 366 DLPLNISREMLQQNKILKVIRKNLVK 391
Score = 131 bits (316), Expect = 7e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = -3
Query: 508 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 329
KKC+ELF E+AE+KE+Y K+YE FSKNLKLGIHEDS NR K++ELLRYH++ SGDE SL
Sbjct: 391 KKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTSL 450
Query: 328 KEYVSRMKENQKHIYYITGENRDQV 254
K+YV+RMKE Q IYYITGE++ V
Sbjct: 451 KDYVTRMKEGQNDIYYITGESKKAV 475
Score = 79.0 bits (186), Expect = 4e-15
Identities = 44/111 (39%), Positives = 61/111 (54%)
Frame = -2
Query: 335 LSQRVCIQDEGEPETYLLHHWRKQRPGANSSFVERVKKRGYEVVYMTEPIDEYVVQQMRE 156
L V EG+ + Y + K+ NS F+E++KK+GYEV+YM + IDEY V Q++E
Sbjct: 450 LKDYVTRMKEGQNDIYYITGESKKAV-ENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKE 508
Query: 155 YDGKTLVSVTXXXXXXXXXXXXXXXXXXXXXXXEGLCKVMKNILDNKVEKV 3
++GK LVS T EGLCKV+K +L +KVEKV
Sbjct: 509 FEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKV 559
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 149 bits (361), Expect = 2e-36
Identities = 68/86 (79%), Positives = 80/86 (93%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 583
GQLEF+A+LFVP+ APFD+F+ +K+ NNIKLYVRRVFIMDNCE+LIPE+L+F+ GVVD E
Sbjct: 554 GQLEFKAILFVPKGAPFDIFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVEGVVDYE 613
Query: 582 DLPLNISREMLQQNKILKVIRKNLVK 505
DLPLNIS E+LQQNKILKVIRKNLVK
Sbjct: 614 DLPLNISFELLQQNKILKVIRKNLVK 639
Score = 77.8 bits (183), Expect = 9e-15
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = -3
Query: 508 KKCLELFEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSL 329
KKC+ELF E+AE+KE+Y K+Y+ FSKNLKLGIHEDS NR K++ELL + L
Sbjct: 639 KKCVELFFEIAENKEDYNKFYKAFSKNLKLGIHEDSTNRTKIAELLSKKAVENSPFLEKL 698
Query: 328 KEY 320
K+Y
Sbjct: 699 KDY 701
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = -2
Query: 251 NSSFVERVKKRGYEVVYMTEPIDEYVVQQMREYDGKTLVSVT 126
NS F+E++K YEV+YM + IDEY V Q E++GK L+S T
Sbjct: 691 NSPFLEKLKD--YEVLYMVDAIDEYAVGQFMEFEGKKLISAT 730
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 115 bits (277), Expect = 4e-26
Identities = 52/90 (57%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVD 589
G +EF+ALLFVP +AP DL+E+ K+N+KLYVRRVFI D ++L+P+YL+F++G+VD
Sbjct: 414 GDVEFKALLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVD 473
Query: 588 SEDLPLNISREMLQQNKILKVIRKNLVKNA 499
S+ LPLN+SREMLQQ+ LK I+K L++ A
Sbjct: 474 SDTLPLNVSREMLQQHSSLKTIKKKLIRKA 503
Score = 82.2 bits (194), Expect = 4e-16
Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = -3
Query: 481 LAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKE 302
+ E K Y K++ +F K++KLGI ED+ NR +L++LLR+ ++ S + SL EY+SRMK
Sbjct: 531 MEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKP 590
Query: 301 NQKHIYYITGENRDQV-RTPHLWR 233
QK I+YITG +++Q+ ++P L R
Sbjct: 591 GQKDIFYITGSSKEQLEKSPFLER 614
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = -2
Query: 248 SSFVERVKKRGYEVVYMTEPIDEYVVQQMREYDGKTLVSVT 126
S F+ER+ K+ YEV+Y T+P+DEY++Q + +Y+ K +V+
Sbjct: 609 SPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVS 649
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 101 bits (241), Expect = 9e-22
Identities = 48/99 (48%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = -1
Query: 792 PSCSQTLLR*GQLEFRALLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCE-DLIPEY 616
P S G++EFR++L+VP D+ + K + NI+LYV+RVFI D+ + +L P Y
Sbjct: 642 PLASSHFTTEGEVEFRSILYVPATKKEDITDRKTK--NIRLYVKRVFISDDFDGELFPRY 699
Query: 615 LNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNLVKNA 499
L+F+RGVVDS DLPLN+SRE+LQ+++I++++RK LV+ A
Sbjct: 700 LSFVRGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKA 738
Score = 72.1 bits (169), Expect = 5e-13
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = -3
Query: 478 AEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKEN 299
+E++++Y++++E + K LKLG ED +N +++ LLR+ +S S +E SL EYV MK
Sbjct: 748 SENRDDYERFWENYGKFLKLGCMEDKENHKRIAPLLRFFSSQSNEELISLDEYVENMKPE 807
Query: 298 QKHIYYITGEN 266
QK IYYI ++
Sbjct: 808 QKDIYYIAADS 818
Score = 35.9 bits (79), Expect = 0.037
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = -2
Query: 251 NSSFVERVKKRGYEVVYMTEPIDEYVVQQMREYDGKTLVSVT 126
++ F+E++ ++ YEV+++ +P+DE V + Y K V ++
Sbjct: 824 HAPFLEKLNEKEYEVLFLVDPMDEVSVTNLNSYKDKRFVDIS 865
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/89 (52%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVV 592
G++EFR++L++P AP E N K KN I+LYV+RVFI D+ + +L P YL+F++GVV
Sbjct: 389 GEVEFRSVLYIPGMAPLSNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVV 447
Query: 591 DSEDLPLNISREMLQQNKILKVIRKNLVK 505
DS DLPLN+SRE+LQ+++I++++RK LV+
Sbjct: 448 DSNDLPLNVSREILQESRIVRIMRKRLVR 476
Score = 81.0 bits (191), Expect = 1e-15
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = -3
Query: 508 KKCLELFEELAE--DKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEAC 335
+K ++ +E+AE DKE+YKK++E F K +KLG ED+ N +L+ LLR+++S + +
Sbjct: 476 RKTFDMIQEIAEKEDKEDYKKFWESFGKFVKLGCIEDTGNHKRLAPLLRFYSSKNETDLI 535
Query: 334 SLKEYVSRMKENQKHIYYITGENRDQVRT 248
SL +YV M ENQK IYYI ++ +T
Sbjct: 536 SLDQYVENMPENQKAIYYIATDSLQSAKT 564
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -2
Query: 242 FVERVKKRGYEVVYMTEPIDEYVVQQMREYDGKTLVSVT 126
F+E++ ++ EV+Y+ EPIDE +Q ++ Y K V ++
Sbjct: 567 FLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDIS 605
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 98.3 bits (234), Expect = 6e-21
Identities = 47/89 (52%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
Frame = -1
Query: 762 GQLEFRALLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVV 592
G++EFR++L++P AP E N K KN I+LYV+RVFI D+ + +L P YL+F++GVV
Sbjct: 639 GEVEFRSVLYIPGMAPLSNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVV 697
Query: 591 DSEDLPLNISREMLQQNKILKVIRKNLVK 505
DS DLPLN+SRE+LQ+++I++++RK LV+
Sbjct: 698 DSNDLPLNVSREILQESRIVRIMRKRLVR 726
Score = 85.4 bits (202), Expect = 5e-17
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = -3
Query: 508 KKCLELFEELAE--DKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEAC 335
+K ++ EE++E DKE+YKK++E F K +KLG ED+ N +L+ LLR+HTS + +
Sbjct: 726 RKTFDMIEEISEKDDKEDYKKFWESFGKFIKLGCIEDTGNHKRLAPLLRFHTSKNEGDLI 785
Query: 334 SLKEYVSRMKENQKHIYYITGENRDQVRT 248
SL +YV M ENQK IYYI ++ +T
Sbjct: 786 SLDQYVENMPENQKAIYYIATDSLQSAKT 814
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -2
Query: 242 FVERVKKRGYEVVYMTEPIDEYVVQQMREYDGKTLVSVT 126
F+E++ ++ EV+Y+ EPIDE +Q ++ Y K V ++
Sbjct: 817 FLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDIS 855
>05_05_0152 +
22762994-22763326,22763857-22763989,22764281-22764362,
22764786-22764939,22765028-22765162
Length = 278
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 271 LQ*CSRYVSGSPSSWIHTL*ESRLHHPML 357
LQ + V G+PSSW H L L HP+L
Sbjct: 42 LQILLQIVRGTPSSWAHLLSFLGLRHPLL 70
>02_05_0587 +
30162806-30163183,30163315-30163478,30163571-30163654,
30163737-30163794,30164092-30164145,30164244-30164309,
30164310-30164381,30164547-30164627,30165361-30165533,
30165916-30166018,30166148-30166279,30166432-30166554,
30166898-30167002,30167397-30167722,30167919-30168258,
30169973-30170113,30170589-30170801,30170901-30171119,
30171272-30171619,30171711-30172043,30172548-30172601
Length = 1188
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 654 FIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNL 511
FI+D CE I +Y F+ G S L L+ + + + +LK + ++L
Sbjct: 438 FILDCCESNIAKYTKFLEG--SSGSLQLSTNSKQANRTLLLKQLARDL 483
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -3
Query: 484 ELAEDKENYKKYYEQFSKNLKLGIHEDSQ-NRAKLSELLRYHTSAS-GDEACSLKEYVSR 311
E E +E Y+ +++ K+ L +D+Q RA S L+R S S G E S + +R
Sbjct: 1250 EARERRERYRSSFKESFKSSNLDNRQDTQFQRAVSSNLMRNPDSYSKGLEVESALRHKAR 1309
Query: 310 MKENQKHIYYIT 275
++ +Q+ +T
Sbjct: 1310 LERHQRTAERVT 1321
>04_04_1696 + 35448667-35449641,35449726-35450562,35450667-35451001,
35451371-35451497,35451594-35451752,35451872-35453053,
35453164-35453424,35453513-35453761
Length = 1374
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 276 LEKTETRCELLICGESEETWL*SSLHD 196
LE T+T+ CG++ ETW+ S LH+
Sbjct: 925 LEGTDTQLINPECGDNRETWIWSPLHE 951
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 490 FEELAEDKENYKKYYEQFSKNLKL 419
+ AEDKE YK+ +++++ LKL
Sbjct: 276 YRHSAEDKERYKREMQEYNERLKL 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,709,032
Number of Sequences: 37544
Number of extensions: 326839
Number of successful extensions: 918
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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