Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0312.Seq
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    26   1.2  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   4.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.2  

>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 460 YKKYYEQFSKNLKLGIHEDSQNRAKLSELL 371
           Y++  + +   ++LG H D   +AKL+E L
Sbjct: 107 YQRVVDYYFPTIQLGAHLDQTKKAKLAEAL 136


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 486 KNWQRTKKTTRSIMNNSART*NWVSMK 406
           +NW+ +K+T  +I    AR   W S K
Sbjct: 269 RNWEESKETETNINPTDARAPAWESDK 295


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 475 EDKENYKKYYEQFSKNLKLGIHED 404
           ED+E +K+   QFSK + LGI  D
Sbjct: 214 EDEEAFKR---QFSKYISLGIKAD 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,506
Number of Sequences: 2352
Number of extensions: 12811
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)