Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0311.Seq
(472 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 101 1e-21
U18247-1|AAA57339.1| 591|Homo sapiens p67 protein. 101 1e-21
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 101 1e-21
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 101 1e-21
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 101 1e-21
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 101 1e-21
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 101 1e-21
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 101 1e-21
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 101 1e-21
BC028142-1|AAH28142.1| 317|Homo sapiens CA5B protein protein. 31 2.7
AB021660-1|BAA76671.1| 317|Homo sapiens carbonic anhydrase VB p... 31 2.7
X74142-1|CAA52239.1| 477|Homo sapiens transcription factor prot... 29 8.1
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 778 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 837
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 838 GQAVDVVGQAG 848
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/23 (73%), Positives = 23/23 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVI 135
GERAELAT+E++P++PI+EGFVI
Sbjct: 868 GERAELATEEFLPVTPILEGFVI 890
>U18247-1|AAA57339.1| 591|Homo sapiens p67 protein.
Length = 591
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 469 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 528
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 529 GQAVDVVGQAG 539
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/23 (73%), Positives = 23/23 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVI 135
GERAELAT+E++P++PI+EGFVI
Sbjct: 559 GERAELATEEFLPVTPILEGFVI 581
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 731 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 790
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 791 GQAVDVVGQAG 801
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/23 (73%), Positives = 23/23 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVI 135
GERAELAT+E++P++PI+EGFVI
Sbjct: 821 GERAELATEEFLPVTPILEGFVI 843
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 787 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 846
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 847 GQAVDVVGQAG 857
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVILKKN 123
GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 877 GERAELATEEFLPVTPILEGFVILRKN 903
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 787 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 846
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 847 GQAVDVVGQAG 857
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVILKKN 123
GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 877 GERAELATEEFLPVTPILEGFVILRKN 903
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 787 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 846
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 847 GQAVDVVGQAG 857
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVILKKN 123
GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 877 GERAELATEEFLPVTPILEGFVILRKN 903
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 787 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 846
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 847 GQAVDVVGQAG 857
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVILKKN 123
GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 877 GERAELATEEFLPVTPILEGFVILRKN 903
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 787 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 846
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 847 GQAVDVVGQAG 857
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVILKKN 123
GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 877 GERAELATEEFLPVTPILEGFVILRKN 903
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 101 bits (242), Expect = 1e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -2
Query: 471 LLNQPALAGXLVVLTAFLDCKTIILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRV 292
L++Q A+AG L VL +FLD + IILGKSHY+LY L AMQPR LVT DE L+PL VSVRV
Sbjct: 792 LMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRV 851
Query: 291 GQAVDVIGKAG 259
GQAVDV+G+AG
Sbjct: 852 GQAVDVVGQAG 862
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/27 (74%), Positives = 27/27 (100%)
Frame = -3
Query: 203 GERAELATDEYIPLSPIMEGFVILKKN 123
GERAELAT+E++P++PI+EGFVIL+KN
Sbjct: 882 GERAELATEEFLPVTPILEGFVILRKN 908
>BC028142-1|AAH28142.1| 317|Homo sapiens CA5B protein protein.
Length = 317
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = -3
Query: 350 PAGWSPSTKIFSP*TSACVWDRLWMLSEKPVHEDNSRFPHSHDAGAAVFGERAELATDEY 171
P W+ S + +P S V W++ ++PV D+ + GE+ + D +
Sbjct: 225 PDYWTYSGSLTTPPLSESV---TWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNF 281
Query: 170 IPLSPIMEGFVILKKNEDSVM 108
PL P+M V D V+
Sbjct: 282 RPLQPLMNRTVRSSFRHDYVL 302
>AB021660-1|BAA76671.1| 317|Homo sapiens carbonic anhydrase VB
protein.
Length = 317
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = -3
Query: 350 PAGWSPSTKIFSP*TSACVWDRLWMLSEKPVHEDNSRFPHSHDAGAAVFGERAELATDEY 171
P W+ S + +P S V W++ ++PV D+ + GE+ + D +
Sbjct: 225 PDYWTYSGSLTTPPLSESV---TWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNF 281
Query: 170 IPLSPIMEGFVILKKNEDSVM 108
PL P+M V D V+
Sbjct: 282 RPLQPLMNRTVRSSFRHDYVL 302
>X74142-1|CAA52239.1| 477|Homo sapiens transcription factor
protein.
Length = 477
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 118 SSFFLRITNPSIIGESG--MYSSVASSARSPKTAAPASCECGNRLLSS-CTGFSDNI 279
S FF + +PS+ +S M + ASS+ SP P CE L S TG S +
Sbjct: 403 SYFFPHVPHPSMTSQSSTSMSARAASSSTSPPAPRPLPCESLRPSLPSFTTGLSGGL 459
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,472,592
Number of Sequences: 237096
Number of extensions: 1206102
Number of successful extensions: 3156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3156
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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