Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0310.Seq
(284 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 25 0.16
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 3.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 3.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 3.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 3.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 3.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 3.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 3.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 3.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 3.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 3.4
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 20 5.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 20 5.9
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 25.0 bits (52), Expect = 0.16
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 246 QLCAGKLAGGVDACQGDSGGPLQVEISLPTSSQGKIYC 133
++C G++A V+ C+G +Q + PT + YC
Sbjct: 48 RICNGEVA--VNKCEGSCKSQVQPSVITPTGFLKECYC 83
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 158 VGRDISTWRGPPESP*HASTPPANFP 235
VG+ W+ P+ S+ P++ P
Sbjct: 60 VGKGFHPWKKSPQGAPSPSSTPSSLP 85
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 70 QDLSTNGAPPR-----STPPLSTPSNS 91
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 164 RDISTWRGPPESP*HASTPPANFPAHS 244
+D+ST PP STPP + P++S
Sbjct: 114 QDLSTNGAPPR-----STPPLSTPSNS 135
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 5.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 234 GKLAGGVDACQGDSGG 187
G GG D +GD GG
Sbjct: 93 GGRGGGRDGDRGDGGG 108
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 19.8 bits (39), Expect = 5.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 168 IFQLGEDLQSHPDMHPLPQ 224
+F++GED + P PQ
Sbjct: 617 VFKIGEDYEMPPVPKDFPQ 635
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,172
Number of Sequences: 336
Number of extensions: 1448
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used: 4897022
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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