Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0310.Seq
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 61 1e-10
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 57 2e-09
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 52 9e-08
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 29 0.41
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 28 0.94
Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical pr... 28 0.94
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 28 0.94
Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 28 1.2
AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 28 1.2
U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated k... 27 2.2
U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated k... 27 2.2
U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated k... 27 2.2
AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated... 27 2.2
AF016443-3|AAC24281.1| 395|Caenorhabditis elegans Hypothetical ... 27 2.9
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 26 3.8
U58739-1|AAB00607.1| 392|Caenorhabditis elegans Hypothetical pr... 26 3.8
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 26 3.8
Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 26 5.0
AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical... 26 5.0
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 26 5.0
AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical ... 26 5.0
Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical p... 25 6.6
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 25 8.7
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 60.9 bits (141), Expect = 1e-10
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -3
Query: 240 CAGKLAGGVDACQGDSGGPLQVEISLPTSSQGKIYCIIGVTSFGIGCDLPELPGXYTRVS 61
CAG L GG+D+CQGDSGGP + + + GV S+G GC + PG YT V+
Sbjct: 197 CAGYLEGGIDSCQGDSGGPFACR------REDGAFVLAGVISWGDGCAQKKQPGIYTMVA 250
Query: 60 SFIDWI 43
++ WI
Sbjct: 251 PYLSWI 256
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 57.2 bits (132), Expect = 2e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = -3
Query: 243 LCAGKLAGGVDACQGDSGGPLQVEISLPTSSQGKIYCIIGVTSFGIGCDLPELPGXYTRV 64
LCAG G +D+CQGDSGGPL ++ + + GV S+GIGC P +PG Y V
Sbjct: 225 LCAGYSYGKIDSCQGDSGGPLM-------CARDGHWELTGVVSWGIGCARPGMPGVYGNV 277
Query: 63 SSFIDWI 43
S WI
Sbjct: 278 HSASTWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 51.6 bits (118), Expect = 9e-08
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Frame = -3
Query: 282 FVQQTLVRCQDHQLCAGKLAGGVDACQGDSGGPLQVEISLPTSSQGKIYCIIGVTSFGIG 103
F+ V+ +Q+CAG G GDSGGPL + S G+ Y IG+TS+G
Sbjct: 202 FLSLLSVKITGYQICAGAYLHGT--APGDSGGPLLIH-----KSNGE-YVQIGITSYGAD 253
Query: 102 -----CDLPELPGXYTRVSSFIDWIEQNVWPTVHQSALS 1
D + PG YTR+S ++ WI+ + T +S+++
Sbjct: 254 GLDGVIDQGKFPGVYTRISKYVPWIQGVIGKTSMRSSVT 292
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 29.5 bits (63), Expect = 0.41
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 207 CQGDSGGPLQVEISLPTSSQGKIYCIIGVTSFGI-GCDLPELPGXYTRVSSFIDWI 43
C GDSGG L+ + G+ + +I +TSFG GC + +TRV +++ I
Sbjct: 235 CHGDSGGGLEYR----DDNYGRAF-LIAITSFGTRGCP-SNMLARFTRVDMYLNLI 284
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.3 bits (60), Expect = 0.94
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 98 SQPIPNDVTPIIQYILP*DDVGRDISTWRGPPESP*HASTPPANFPAHS 244
S P P+ VTP ++ + D ++ R PP +P A+ PP P +S
Sbjct: 307 SMPSPHAVTPELKRLASKDS---NVDRPRTPPVTPASAAPPPPGIPYNS 352
>Z81118-2|CAB03324.2| 318|Caenorhabditis elegans Hypothetical
protein T10G3.1 protein.
Length = 318
Score = 28.3 bits (60), Expect = 0.94
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 186 DLQSHPDMHPLPQPTSQRTADD 251
+L PD HP P PT TA+D
Sbjct: 104 ELVHEPDQHPSPAPTEPLTAND 125
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.3 bits (60), Expect = 0.94
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 98 SQPIPNDVTPIIQYILP*DDVGRDISTWRGPPESP*HASTPPANFPAHS 244
S P P+ VTP ++ + D ++ R PP +P A+ PP P +S
Sbjct: 307 SMPSPHAVTPELKRLASKDS---NVDRPRTPPVTPASAAPPPPGIPYNS 352
>Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical
protein C40C9.1 protein.
Length = 364
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 168 SLPTSSQGKIYCIIGVTSFGIGCDLPELPGXYTRVSSFIDWIEQNVWPTVHQSALS 1
S P+++ GK++C+I FG+ L RV++FI + ++HQ +
Sbjct: 102 SAPSTNAGKLFCMI-FALFGVPMGLIMFQSIGERVNTFIAYSLHKFRDSLHQQGFT 156
>AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative
potassium channel subunitn2P20 protein.
Length = 364
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 168 SLPTSSQGKIYCIIGVTSFGIGCDLPELPGXYTRVSSFIDWIEQNVWPTVHQSALS 1
S P+++ GK++C+I FG+ L RV++FI + ++HQ +
Sbjct: 102 SAPSTNAGKLFCMI-FALFGVPMGLIMFQSIGERVNTFIAYSLHKFRDSLHQQGFT 156
>U58726-7|AAP13770.1| 562|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform c protein.
Length = 562
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 28 PNILFDPINEARHSRVXPGQFREIT 102
PN LF PINE+ S V RE+T
Sbjct: 282 PNYLFPPINESEASIVDIEAVREVT 306
>U58726-6|AAM69095.1| 624|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform a protein.
Length = 624
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 28 PNILFDPINEARHSRVXPGQFREIT 102
PN LF PINE+ S V RE+T
Sbjct: 344 PNYLFPPINESEASIVDIEAVREVT 368
>U58726-5|AAM69096.1| 626|Caenorhabditis elegans Amp-activated
kinase protein 2,isoform b protein.
Length = 626
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 28 PNILFDPINEARHSRVXPGQFREIT 102
PN LF PINE+ S V RE+T
Sbjct: 344 PNYLFPPINESEASIVDIEAVREVT 368
>AY347273-1|AAR06928.1| 624|Caenorhabditis elegans AMP-activated
protein kinase alphasubunit 1 protein.
Length = 624
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 28 PNILFDPINEARHSRVXPGQFREIT 102
PN LF PINE+ S V RE+T
Sbjct: 344 PNYLFPPINESEASIVDIEAVREVT 368
>AF016443-3|AAC24281.1| 395|Caenorhabditis elegans Hypothetical
protein C17E7.7 protein.
Length = 395
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 10 TLVDCRPNILFDPINEARHSRVXPGQFREITA 105
+++ C P++ ++P N A S+V Q +E TA
Sbjct: 306 SIIFCNPDVFYEPENSAAQSKV-ASQQQEFTA 336
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 284 TSCNRHWCGVKIISCALGSWLGEWMHVR 201
T N W +++ ALG+WL E H +
Sbjct: 713 TQMNHRWERLRVAVDALGNWLSEARHAQ 740
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 284 TSCNRHWCGVKIISCALGSWLGEWMHVR 201
T N W +++ ALG+WL E H +
Sbjct: 713 TQMNHRWERLRVAVDALGNWLSEARHAQ 740
>U58739-1|AAB00607.1| 392|Caenorhabditis elegans Hypothetical
protein F28C10.3 protein.
Length = 392
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = +2
Query: 14 WWTVGQTFCSIQSMK-----LDTLVYXPGSSGRSQPIPNDVTP 127
WW VG T+C ++S K D+ Y ++ + +P ++P
Sbjct: 210 WWAVGITYCDMRSDKAVFDGADSKEYSDSTAKKRPRLPKVLSP 252
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 284 TSCNRHWCGVKIISCALGSWLGEWMHVR 201
T N W +++ ALG+WL E H +
Sbjct: 713 TQMNHRWERLRVAVDALGNWLSEARHAQ 740
>Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 177 VEISLPTSSQGKIYCIIGVTSFGI 106
++I LP S +GK+ + G++ FG+
Sbjct: 157 LQIGLPNSPRGKLALVSGISIFGM 180
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 195 SHPDMHPLPQPTSQRT 242
SHPD P+P+ +S RT
Sbjct: 813 SHPDTSPIPKSSSHRT 828
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 195 SHPDMHPLPQPTSQRT 242
SHPD P+P+ +S RT
Sbjct: 811 SHPDTSPIPKSSSHRT 826
>AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 177 VEISLPTSSQGKIYCIIGVTSFGI 106
++I LP S +GK+ + G++ FG+
Sbjct: 157 LQIGLPNSPRGKLALVSGISIFGM 180
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 195 SHPDMHPLPQPTSQRT 242
SHPD P+P+ +S RT
Sbjct: 811 SHPDTSPIPKSSSHRT 826
>AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical
protein Y32G9A.5 protein.
Length = 275
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 129 IGVTSFGIGCDLPELPGXYTRVSSFID 49
+G + + +G D P+ PG Y +S D
Sbjct: 229 LGSSQYPLGSDAPQYPGNYNAFASTFD 255
>Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 243 LCAGKLAGGVDACQGDSGGPLQVEISLP 160
+C GK++ G+D C +S + + I P
Sbjct: 639 VCRGKVSEGIDFCDAESRAVIIIGIPYP 666
>Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 243 LCAGKLAGGVDACQGDSGGPLQVEISLP 160
+C GK++ G+D C +S + + I P
Sbjct: 639 VCRGKVSEGIDFCDAESRAVIIIGIPYP 666
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical
protein C50H2.1 protein.
Length = 929
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 244 AVRWEVGWGSGCMSG*LWRSSPS*NISSYIVSRQDILYNRRDVIRDRL*SP 92
AV W+ GWG +G L + I S + ++ YN R R R SP
Sbjct: 501 AVWWQTGWGCRA-AGFLAVFASELGIISMFLIAFEMSYNTRQSFRGRRLSP 550
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 244 AVRWEVGWGSGCMSG*LWRSSPS*NISSYIVSRQDILYNRRDVIRDRL*SP 92
AV W+ GWG +G L + I S + ++ YN R R R SP
Sbjct: 501 AVWWQTGWGCRA-AGFLAVFASELGIISMFLIAFEMSYNTRQSFRGRRLSP 550
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,510,000
Number of Sequences: 27780
Number of extensions: 151141
Number of successful extensions: 466
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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