Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0307.Seq
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.2  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    24   4.2  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   5.6  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   9.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 573 VPPQSNSPPGSVLEPDHAGVLKATSVSATSPLCTLG 466
           +PP SNS P S   PD      A++ S++S L   G
Sbjct: 868 MPPSSNSSPSSYPSPDVVISGLASNNSSSSNLVAAG 903


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 212  SHCPYLLSSETTAK--ERAWENQRGKKTLLSLTLVWH 316
            S+CP++L SET     +R  E +  +  + +L LVW+
Sbjct: 904  SNCPHILPSETEIDNIQRVIELKSREGAVSTLGLVWN 940


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 482 GDVAETLVAFKTPA*SGSRTLPGGEFDWGGTSVKE 586
           GD  ++++   T A +  R   GG F  GGT +K+
Sbjct: 10  GDEIQSVLGELTGARTVPRVFIGGNFVGGGTDIKK 44


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 174 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 64
           D +F  L RV  TPA  P  +EFL + D      + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 352 DRFARSSLKNHYFHCFITYSVGRKRC 429
           DRFA ++    + H F+ +  G + C
Sbjct: 425 DRFALAATHARHTHAFLPFGDGPRNC 450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,213
Number of Sequences: 2352
Number of extensions: 16071
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)