Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0307.Seq
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.     32   1.8  
BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member...    31   3.2  
AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.    31   3.2  
BC063686-1|AAH63686.1|  347|Homo sapiens HECTD1 protein protein.       30   9.8  
BC011658-1|AAH11658.2|  520|Homo sapiens HECTD1 protein protein.       30   9.8  
AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein.               30   9.8  
AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin r...    30   9.8  
AL110222-1|CAB53681.1|  959|Homo sapiens hypothetical protein pr...    30   9.8  
AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein.     30   9.8  

>AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.
          Length = 235

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 25/81 (30%), Positives = 36/81 (44%)
 Frame = -1

Query: 561 SNSPPGSVLEPDHAGVLKATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVV 382
           S+  PGS  +P HA V  A + + + P    G     P +++ R    P+  S  T    
Sbjct: 50  SSHTPGS-RQPGHASVPTARARTLSPPQHRCGFACLGPREVVGRTSGHPSMQS--TPGFT 106

Query: 381 VFQRRSRETISHLCYTSHVSL 319
               R RET S LC+  H +L
Sbjct: 107 FGNLRVRETSSRLCHKLHQNL 127


>BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member 3
           (NESH) binding protein protein.
          Length = 1075

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
 Frame = -1

Query: 672 EHLDQASFCPFAPR--EVSVLAELALGHLRYSLTDVPPQSNSP---PGSVLEPDHAGVLK 508
           E  DQ++  PF  +    + LA+      R+  T  P  S+ P   PG    P  +G  +
Sbjct: 630 EETDQSTQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADR 689

Query: 507 ATSVSATSPLCTLGTKHRAPADIID----RAPLPPNRVSNE 397
             SV +T P    GT+ R P         R PLPPN V+ +
Sbjct: 690 NVSVDSTHPTKKPGTR-RPPLPPRPTHPRRKPLPPNNVTGK 729


>AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.
          Length = 1056

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = -1

Query: 624 SVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLKATSVSATSPLCTLGTKHRAPA 445
           S LA  ++G L  S +  P    +  GSVL P   G++   S    SP  TLG  + AP 
Sbjct: 116 SSLAPTSVGQLVMSASAGPKPPPATTGSVLAPTSLGLVMPASAGPRSPPVTLG-PNLAPT 174

Query: 444 DIIDRAPLPPNRV 406
              D+   PP  V
Sbjct: 175 S-RDQKQEPPASV 186


>BC063686-1|AAH63686.1|  347|Homo sapiens HECTD1 protein protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 287 SSFPADSPKPVPWLWFR*IVDRDSGNLVNP 198
           S F  D PKP P  WF  I+  +   LVNP
Sbjct: 62  SEFILDPPKPKPPAWFNGILTWEDFELVNP 91


>BC011658-1|AAH11658.2|  520|Homo sapiens HECTD1 protein protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 287 SSFPADSPKPVPWLWFR*IVDRDSGNLVNP 198
           S F  D PKP P  WF  I+  +   LVNP
Sbjct: 235 SEFILDPPKPKPPAWFNGILTWEDFELVNP 264


>AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein.
          Length = 1224

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 287  SSFPADSPKPVPWLWFR*IVDRDSGNLVNP 198
            S F  D PKP P  WF  I+  +   LVNP
Sbjct: 939  SEFILDPPKPKPPAWFNGILTWEDFELVNP 968


>AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin
            receptor protein.
          Length = 2612

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 287  SSFPADSPKPVPWLWFR*IVDRDSGNLVNP 198
            S F  D PKP P  WF  I+  +   LVNP
Sbjct: 2327 SEFILDPPKPKPPAWFNGILTWEDFELVNP 2356


>AL110222-1|CAB53681.1|  959|Homo sapiens hypothetical protein
           protein.
          Length = 959

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 287 SSFPADSPKPVPWLWFR*IVDRDSGNLVNP 198
           S F  D PKP P  WF  I+  +   LVNP
Sbjct: 674 SEFILDPPKPKPPAWFNGILTWEDFELVNP 703


>AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein.
          Length = 2168

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 287  SSFPADSPKPVPWLWFR*IVDRDSGNLVNP 198
            S F  D PKP P  WF  I+  +   LVNP
Sbjct: 1883 SEFILDPPKPKPPAWFNGILTWEDFELVNP 1912


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,772,732
Number of Sequences: 237096
Number of extensions: 2508146
Number of successful extensions: 6388
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6388
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)