Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0305.Seq
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.8  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.9  
Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           23   6.5  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           23   6.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.6  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.6  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 133 NSSRTSRRRLQATL 92
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 292 YEPERHLNVHPSPNFQGPQRVSGHRRKCGA 203
           ++ + H   H +    GP  +S  R  CGA
Sbjct: 655 HQGQHHAQHHSNGTHHGPSLMSSARESCGA 684


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 394 LALRTGACRVWTGSGCSRCRVWSM 465
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 304 CGYGYEPERHLNVHPSPNFQGPQRVSGHRRKCGALRV 194
           C      +RH  V PSP+F    R +  +R  G   +
Sbjct: 18  CAEAQANQRHRLVRPSPSFSPRPRYAVGQRIVGGFEI 54


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 304 CGYGYEPERHLNVHPSPNFQGPQRVSGHRRKCGALRV 194
           C      +RH  V PSP+F    R +  +R  G   +
Sbjct: 18  CAEAQANQRHRLVRPSPSFSPRPRYAVGQRIVGGFEI 54


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 195 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 76
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 195 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 76
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +3

Query: 372 IRNFGIRIGSEDRGVSGLDGKRMQPVPG 455
           I N  I      R VSGLD  R  P PG
Sbjct: 10  IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,166
Number of Sequences: 2352
Number of extensions: 15495
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)