Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0305.Seq
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 33 1.2
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein. 33 1.2
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein. 33 1.2
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein. 33 1.2
AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens ... 31 3.7
AK000973-1|BAA91450.1| 505|Homo sapiens protein ( Homo sapiens ... 31 4.9
BC029104-1|AAH29104.1| 792|Homo sapiens CPT1C protein protein. 30 6.4
AK074389-1|BAB85068.1| 507|Homo sapiens actosyltransferase. pr... 30 6.4
AF357970-2|AAL99615.1| 803|Homo sapiens carnitine palmitoyltran... 30 6.4
AF331918-1|AAQ14875.1| 803|Homo sapiens carnitine acyltransfera... 30 6.4
AB208884-1|BAD92121.1| 400|Homo sapiens carnitine palmitoyltran... 30 6.4
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -1
Query: 280 RHLNVHPSPNFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 101
RH N P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 2589 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2646
Query: 100 ATLGYPVEHSF 68
TL +P+ F
Sbjct: 2647 RTLNHPLGGEF 2657
>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
Length = 4025
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -1
Query: 280 RHLNVHPSPNFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 101
RH N P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707
Query: 100 ATLGYPVEHSF 68
TL +P+ F
Sbjct: 1708 RTLNHPLGGEF 1718
>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
Length = 2185
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -1
Query: 280 RHLNVHPSPNFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 101
RH N P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707
Query: 100 ATLGYPVEHSF 68
TL +P+ F
Sbjct: 1708 RTLNHPLGGEF 1718
>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
Length = 3310
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -1
Query: 280 RHLNVHPSPNFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 101
RH N P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 2034 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2091
Query: 100 ATLGYPVEHSF 68
TL +P+ F
Sbjct: 2092 RTLNHPLGGEF 2102
>AK125693-1|BAC86247.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ43705 fis, clone TESOP2001818. ).
Length = 321
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 13 PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAER 120
P+P G+ T ++PS+L+ ++ G P W ED+ R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262
>AK000973-1|BAA91450.1| 505|Homo sapiens protein ( Homo sapiens
cDNA FLJ10111 fis, clone HEMBA1002696. ).
Length = 505
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 316 LETCCGYGYEPERHLNVHPSPNFQGPQRVSGHRRKCGALRVPN 188
L C +G EP +LN P+P++ GP + S RR +P+
Sbjct: 56 LVRCNAHG-EPRNYLNTLPTPSWDGPDKQSLVRRLLAVYALPS 97
>BC029104-1|AAH29104.1| 792|Homo sapiens CPT1C protein protein.
Length = 792
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 322 FTLET-CCGYGYEPERHLNVHPSPNFQGPQRV 230
FTL T C GY + H HP P PQR+
Sbjct: 473 FTLATECFQLGYSTDGHCKGHPDPTLPQPQRL 504
>AK074389-1|BAB85068.1| 507|Homo sapiens actosyltransferase.
protein.
Length = 507
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 322 FTLET-CCGYGYEPERHLNVHPSPNFQGPQRV 230
FTL T C GY + H HP P PQR+
Sbjct: 188 FTLATECFQLGYSTDGHCKGHPDPTLPQPQRL 219
>AF357970-2|AAL99615.1| 803|Homo sapiens carnitine
palmitoyltransferase IC protein.
Length = 803
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 322 FTLET-CCGYGYEPERHLNVHPSPNFQGPQRV 230
FTL T C GY + H HP P PQR+
Sbjct: 484 FTLATECFQLGYSTDGHCKGHPDPTLPQPQRL 515
>AF331918-1|AAQ14875.1| 803|Homo sapiens carnitine
acyltransferase-like protein 1 protein.
Length = 803
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 322 FTLET-CCGYGYEPERHLNVHPSPNFQGPQRV 230
FTL T C GY + H HP P PQR+
Sbjct: 484 FTLATECFQLGYSTDGHCKGHPDPTLPQPQRL 515
>AB208884-1|BAD92121.1| 400|Homo sapiens carnitine
palmitoyltransferase 1C variant protein.
Length = 400
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 322 FTLET-CCGYGYEPERHLNVHPSPNFQGPQRV 230
FTL T C GY + H HP P PQR+
Sbjct: 270 FTLATECFQLGYSTDGHCKGHPDPTLPQPQRL 301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,628,469
Number of Sequences: 237096
Number of extensions: 2362791
Number of successful extensions: 6783
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6783
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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