Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0304.Seq
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.73 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.0  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +2

Query: 416 ICSLVYVCDSWYNRIKYNNIF----FVTSRQVFR 505
           I +++Y+C+  YN ++ + IF    F   R  FR
Sbjct: 280 IVNVLYICNQCYNTVEESRIFGLVTFTPDRSKFR 313



 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 416 ICSLVYVCDSWYNRIKYNN 472
           +  +VYVCD  Y+ I+  N
Sbjct: 570 VIDVVYVCDVCYSTIEEAN 588


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 545 TSFRIMCVWY 574
           T + +MC+WY
Sbjct: 289 TPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 545 TSFRIMCVWY 574
           T + +MC+WY
Sbjct: 289 TPYYVMCIWY 298


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 416 ICSLVYVCDSWYNRIKYNN 472
           +  +VYVCD  Y+ I+  N
Sbjct: 295 VIDVVYVCDVCYSTIEEAN 313


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 458 IKYNNIFFVT 487
           +KY NIFF+T
Sbjct: 19  VKYLNIFFIT 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,977
Number of Sequences: 336
Number of extensions: 2755
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)