Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0303.Seq
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048216-1|AAH48216.1|  620|Homo sapiens deltex homolog 1 (Droso...    30   6.5  
AP001759-1|BAA95497.1|   94|Homo sapiens C21orf56 protein.             30   6.5  
AF053700-1|AAC06246.1|  620|Homo sapiens deltex protein.               30   6.5  
BC004873-1|AAH04873.1|  620|Homo sapiens centrosomal protein 68k...    30   8.6  
BC002982-1|AAH02982.1|  620|Homo sapiens centrosomal protein 68k...    30   8.6  
AC007386-1|AAF03518.2|  532|Homo sapiens unknown protein.              30   8.6  

>BC048216-1|AAH48216.1|  620|Homo sapiens deltex homolog 1
           (Drosophila) protein.
          Length = 620

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -2

Query: 272 AAERVSPRPTPGAPPRSRGALAAKR 198
           AA    P P PGAPPRS GA    R
Sbjct: 263 AAGPAEPAPPPGAPPRSPGAPGGAR 287


>AP001759-1|BAA95497.1|   94|Homo sapiens C21orf56 protein.
          Length = 94

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 290 AAACKSAAERVSPRPTPGAPPRSRGALAAKRL 195
           + AC S+  R +   +PG PPR+R    +KR+
Sbjct: 4   STACASSPRRTASPSSPGEPPRARRLACSKRV 35


>AF053700-1|AAC06246.1|  620|Homo sapiens deltex protein.
          Length = 620

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -2

Query: 272 AAERVSPRPTPGAPPRSRGALAAKR 198
           AA    P P PGAPPRS GA    R
Sbjct: 263 AAGPAEPAPPPGAPPRSPGAPGGAR 287


>BC004873-1|AAH04873.1|  620|Homo sapiens centrosomal protein 68kDa
           protein.
          Length = 620

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 8   PRPGPSG-KRTS--CRKATPARSRLATNAHPERRS*HS--PTMVTPTKCCQLEALCC 163
           P P P   KRTS   R+ T   SR  +    E    +   P  +T T CCQLE L C
Sbjct: 446 PSPRPEREKRTSQSARRPTCTESRWKSEEEVESDDEYLALPARLTQTFCCQLEELIC 502


>BC002982-1|AAH02982.1|  620|Homo sapiens centrosomal protein 68kDa
           protein.
          Length = 620

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 8   PRPGPSG-KRTS--CRKATPARSRLATNAHPERRS*HS--PTMVTPTKCCQLEALCC 163
           P P P   KRTS   R+ T   SR  +    E    +   P  +T T CCQLE L C
Sbjct: 446 PSPRPEREKRTSQSARRPTCTESRWKSEEEVESDDEYLALPARLTQTFCCQLEELIC 502


>AC007386-1|AAF03518.2|  532|Homo sapiens unknown protein.
          Length = 532

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +2

Query: 8   PRPGPSG-KRTS--CRKATPARSRLATNAHPERRS*HS--PTMVTPTKCCQLEALCC 163
           P P P   KRTS   R+ T   SR  +    E    +   P  +T T CCQLE L C
Sbjct: 446 PSPRPEREKRTSQSARRPTCTESRWKSEEEVESDDEYLALPARLTQTFCCQLEELIC 502


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,989,780
Number of Sequences: 237096
Number of extensions: 1905637
Number of successful extensions: 5213
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5206
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)