Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0300X.Seq
         (404 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.28 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   3.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   3.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   4.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   4.6  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.28
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 372 SQIICTLTINSFFFIIFNCLIHCAVHLSFTPQPDLY 265
           S II T  +N+F+FIIF       +H + T +   Y
Sbjct: 286 SYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYY 321


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 213 LNINYWIVGLYSNYNAFDR 269
           +N+ +W++ L SNY AF R
Sbjct: 102 VNVFFWVIILMSNY-AFTR 119


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 390 LIVIYQSQIICTLTINSFFFIIFNCLI 310
           L+ +    ++ T+ ++ FFF +FN L+
Sbjct: 104 LLWVLLGVMVVTVDLHVFFFTLFNKLL 130


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 239 ANNPVVNVQTIQILLMLK*SFLI*VILVYNII 144
           A N  V  QTI+++ MLK  F+I    + N+I
Sbjct: 448 AMNSAVCHQTIELVKMLKIRFVILNKQINNLI 479


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 239 ANNPVVNVQTIQILLMLK*SFLI*VILVYNII 144
           A N  V  QTI+++ MLK  F+I    + N+I
Sbjct: 173 AMNSAVCHQTIELVKMLKIRFVILNKQINNLI 204


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 210 RLNINYWIVGLYSNYNAF 263
           + N NY     YSNYN +
Sbjct: 210 QFNFNYQYNQAYSNYNNY 227


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 210 RLNINYWIVGLYSNYNAF 263
           + N NY     YSNYN +
Sbjct: 230 QFNFNYQYNQAYSNYNNY 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,973
Number of Sequences: 336
Number of extensions: 1502
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)