Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0300X.Seq
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   3.2  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    23   5.6  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    22   9.8  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 265 IEIRLWSKAQMYCTMNKTIEYNKKK 339
           + ++ W K  +    N TI YN+K+
Sbjct: 11  VYVQTWEKVNIKGNPNGTISYNQKR 35


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 289 AQMYCTMNKTIEYNKKKTI 345
           AQM  TMNK  E N +KT+
Sbjct: 82  AQMAGTMNKKGEINVQKTL 100


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 289 AQMYCTMNKTIEYNKKKTI 345
           AQM  TMNK  E N  KT+
Sbjct: 84  AQMAGTMNKKGEINVPKTL 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,305
Number of Sequences: 2352
Number of extensions: 6385
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)