Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0299.Seq
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 223 1e-58
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 223 1e-58
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 223 1e-58
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 222 2e-58
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 221 4e-58
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 220 7e-58
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 219 1e-57
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 219 1e-57
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 219 2e-57
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 109 2e-24
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 109 2e-24
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 109 2e-24
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 109 2e-24
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 109 3e-24
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 109 3e-24
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 105 2e-23
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 81 8e-16
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 81 1e-15
At2g46810.1 68415.m05841 basic helix-loop-helix (bHLH) family pr... 35 0.066
At4g37190.1 68417.m05265 expressed protein 34 0.087
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 32 0.46
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 31 0.81
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 31 0.81
At4g20080.1 68417.m02937 C2 domain-containing protein contains I... 30 1.9
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.9
At3g62910.1 68416.m07067 peptide chain release factor, putative ... 29 2.5
At3g59530.2 68416.m06644 strictosidine synthase family protein s... 29 4.3
At3g59530.1 68416.m06643 strictosidine synthase family protein s... 29 4.3
At5g22450.1 68418.m02618 expressed protein 28 5.7
At5g12970.1 68418.m01487 C2 domain-containing protein contains I... 28 5.7
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 28 5.7
At1g04150.1 68414.m00405 C2 domain-containing protein contains I... 28 5.7
At4g25800.1 68417.m03712 calmodulin-binding protein similar to c... 28 7.6
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 7.6
At2g44070.1 68415.m05481 eukaryotic translation initiation facto... 28 7.6
At1g57700.1 68414.m06548 protein kinase family protein contains ... 28 7.6
At5g26180.2 68418.m03115 NOL1/NOP2/sun family protein similar to... 27 10.0
At5g26180.1 68418.m03114 NOL1/NOP2/sun family protein similar to... 27 10.0
At4g27300.1 68417.m03917 S-locus protein kinase, putative simila... 27 10.0
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 27 10.0
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 10.0
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 223 bits (545), Expect = 1e-58
Identities = 106/136 (77%), Positives = 114/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 126 bits (305), Expect = 1e-29
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKL+ PT+GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISAT 232
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 223 bits (545), Expect = 1e-58
Identities = 106/136 (77%), Positives = 114/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 124 bits (299), Expect = 6e-29
Identities = 52/70 (74%), Positives = 63/70 (90%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKLSTP++GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLSTPSFGDLNHLISAT 232
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 223 bits (544), Expect = 1e-58
Identities = 106/136 (77%), Positives = 114/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 124 bits (298), Expect = 8e-29
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKL+TP++GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISAT 232
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 222 bits (543), Expect = 2e-58
Identities = 105/136 (77%), Positives = 114/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 188
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 189 SVHQLVENADECMVLD 204
Score = 128 bits (310), Expect = 3e-30
Identities = 56/71 (78%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 228
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 229 VPRAILVDLSP 261
VPRA+L+DL P
Sbjct: 61 VPRAVLMDLEP 71
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKLSTP++GDLNHL+S T
Sbjct: 205 NEALYDICFRTLKLSTPSFGDLNHLISAT 233
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 221 bits (540), Expect = 4e-58
Identities = 104/136 (76%), Positives = 114/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 188
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 189 SVHQLVENADECMVLD 204
Score = 133 bits (321), Expect = 1e-31
Identities = 57/71 (80%), Positives = 66/71 (92%), Gaps = 1/71 (1%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 228
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 229 VPRAILVDLSP 261
VPRA+L+DL P
Sbjct: 61 VPRAVLMDLEP 71
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKLSTP++GDLNHL+S T
Sbjct: 205 NEALYDICFRTLKLSTPSFGDLNHLISAT 233
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 220 bits (538), Expect = 7e-58
Identities = 104/136 (76%), Positives = 114/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 130 bits (315), Expect = 7e-31
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 232 PRAILVDLSP 261
PRAIL+DL P
Sbjct: 61 PRAILMDLEP 70
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKL+TP++GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISAT 232
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 219 bits (536), Expect = 1e-57
Identities = 104/136 (76%), Positives = 113/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 129 bits (312), Expect = 2e-30
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKL+TP++GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISAT 232
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 219 bits (536), Expect = 1e-57
Identities = 104/136 (76%), Positives = 113/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 129 bits (312), Expect = 2e-30
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKL+TP++GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISAT 232
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 219 bits (535), Expect = 2e-57
Identities = 105/136 (77%), Positives = 113/136 (83%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
DCLQGFQ+ H G KIREEYPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Query: 612 SVHQLVENTDETYCID 659
SVHQLVEN DE +D
Sbjct: 188 SVHQLVENADECMVLD 203
Score = 129 bits (311), Expect = 2e-30
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 231
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEALYDICFRTLKL+ PT+GDLNHL+S T
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISAT 232
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 54/136 (39%), Positives = 83/136 (61%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ +Y + ++V PSP+VS +VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD + +D
Sbjct: 190 STHSLLEHTDVSILLD 205
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 225
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVS 741
NEA+YDIC R+L + PTY +LN LVS
Sbjct: 206 NEAIYDICRRSLNIERPTYTNLNRLVS 232
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 109 bits (262), Expect = 2e-24
Identities = 54/136 (39%), Positives = 83/136 (61%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ +Y + ++V PSP+VS +VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD + +D
Sbjct: 190 STHSLLEHTDVSILLD 205
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 225
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVS 741
NEA+YDIC R+L + PTY +LN LVS
Sbjct: 206 NEAIYDICRRSLNIERPTYTNLNRLVS 232
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 54/136 (39%), Positives = 83/136 (61%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ +Y + ++V PSP+VS +VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD + +D
Sbjct: 190 STHSLLEHTDVSILLD 205
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 225
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVS 741
NEA+YDIC R+L + PTY +LN LVS
Sbjct: 206 NEAIYDICRRSLSIERPTYTNLNRLVS 232
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 54/136 (39%), Positives = 83/136 (61%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ +Y + ++V PSP+VS +VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD + +D
Sbjct: 190 STHSLLEHTDVSILLD 205
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 225
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVS 741
NEA+YDIC R+L + PTY +LN LVS
Sbjct: 206 NEAIYDICRRSLSIERPTYTNLNRLVS 232
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 109 bits (261), Expect = 3e-24
Identities = 54/136 (39%), Positives = 81/136 (59%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ +Y + +++ PSP+VS VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD +D
Sbjct: 190 STHSLLEHTDVAVLLD 205
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 225
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVS 741
NEA+YDIC R+L + PTY +LN L+S
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLIS 232
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 109 bits (261), Expect = 3e-24
Identities = 54/136 (39%), Positives = 81/136 (59%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ +Y + +++ PSP+VS VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD +D
Sbjct: 190 STHSLLEHTDVAVLLD 205
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 225
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVS 741
NEA+YDIC R+L + PTY +LN L+S
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLIS 232
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 105 bits (253), Expect = 2e-23
Identities = 51/136 (37%), Positives = 82/136 (60%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 431
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNC 129
Query: 432 DCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATL 611
LQGF + + G ++ ++ + +++ PSP+VS VVEPYN+ L
Sbjct: 130 TGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVL 189
Query: 612 SVHQLVENTDETYCID 659
S H L+E+TD +D
Sbjct: 190 STHSLLEHTDVVVLLD 205
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 225
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ +DL P
Sbjct: 61 HVPRAVFLDLEP 72
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 661 NEALYDICFRTLKLSTPTYGDLNHLVSLT 747
NEA+YDIC R+L + PTY +LN L+S T
Sbjct: 206 NEAIYDICRRSLDIERPTYSNLNRLISQT 234
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 81.0 bits (191), Expect = 8e-16
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESE 425
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 426 SCDCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYN 602
D L+GF L H G + + Y +++ TYSV P+ + SD VV+PYN
Sbjct: 128 GSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYN 187
Query: 603 ATLSVHQLVENTDETYCID 659
+ L++ +L N D +D
Sbjct: 188 SLLTLKRLTLNADCVVVLD 206
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +1
Query: 55 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 234
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 235 RAILVDLSP 261
RA+L+DL P
Sbjct: 63 RALLIDLEP 71
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 80.6 bits (190), Expect = 1e-15
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESE 425
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 426 SCDCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYN 602
D L+GF L H G + + Y +++ TYSV P+ + SD VV+PYN
Sbjct: 128 GSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYN 187
Query: 603 ATLSVHQLVENTDETYCID 659
+ L++ +L N D +D
Sbjct: 188 SLLTLKRLTLNADCVVVLD 206
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +1
Query: 55 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 234
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 235 RAILVDLSP 261
RA+L+DL P
Sbjct: 63 RALLIDLEP 71
>At2g46810.1 68415.m05841 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 371
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 585 VVEPYNATLSVHQLVENTDETYCIDKRGSIRHLLPHSQTVHTH 713
V+ N + +HQ V+ DE +C+D++ ++R L +TV H
Sbjct: 3 VLRVSNQSFKLHQQVQCKDEIFCLDQKVNVRRSLQVQETVEDH 45
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 34.3 bits (75), Expect = 0.087
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 52 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 219
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 220 GKYVPRAILVDLSPAPWTLSA 282
Y PR + V+L A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 471 WRHRVRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 617
W +R R HPPH+ R +PD + + P+ + +D V Y+ SV
Sbjct: 887 WNYRYRPRHPPHMDARVSQADNAHPDELDEEFDTFPTSRPADIVRMRYDRLRSV 940
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 471 WRHRVRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 617
W +R R HPPH+ R +PD + + P+ + SD V Y+ S+
Sbjct: 631 WYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 684
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 471 WRHRVRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 617
W +R R HPPH+ R +PD + + P+ + SD V Y+ S+
Sbjct: 634 WYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 687
>At4g20080.1 68417.m02937 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 774
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 462 FPRWRHRVRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
F +R +R HPPH+ I+ PD + + V PS K D + Y+
Sbjct: 628 FGLYRFGLRPRHPPHMDIKLSKADSALPDELDEEFDVFPSSKSGDVLKRRYD 679
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +3
Query: 384 LVDSVLDVVRKESESCDCLQGFQLTHFPRWRHRVRYGHPPHLKIREEYPDRIMNTYSVVP 563
+++SV VVRKE+E+C+CLQ F ++ ++ RE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVS--GSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 564 SPKVSDTVVEP 596
S ++ D V+ P
Sbjct: 58 SFELEDEVMLP 68
>At3g62910.1 68416.m07067 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 422
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2
Query: 408 LHRGP----SQRAQHPLCSVPWPSCCQRRTVRRRSCPDGRSVRKVQSGQSPW 265
LH P S+++ +C V WP RRT R + +RK++S + W
Sbjct: 17 LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTW 68
>At3g59530.2 68416.m06644 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 403
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = +3
Query: 297 QIFRPDNFVFGQSGAG--NNWAKGHYTE--GAELVDSVLDVVRKESESCDCLQGFQLTHF 464
Q+F P++ F G G A G G + VV + C++G T
Sbjct: 81 QVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVTSKWSEEACVRGVDSTTN 140
Query: 465 PRWRHRVRYGHPPHLKIREE 524
+W+H G P L+ +E
Sbjct: 141 KQWKHEKLCGRPLGLRFHKE 160
>At3g59530.1 68416.m06643 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 403
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = +3
Query: 297 QIFRPDNFVFGQSGAG--NNWAKGHYTE--GAELVDSVLDVVRKESESCDCLQGFQLTHF 464
Q+F P++ F G G A G G + VV + C++G T
Sbjct: 81 QVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVTSKWSEEACVRGVDSTTN 140
Query: 465 PRWRHRVRYGHPPHLKIREE 524
+W+H G P L+ +E
Sbjct: 141 KQWKHEKLCGRPLGLRFHKE 160
>At5g22450.1 68418.m02618 expressed protein
Length = 1180
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/75 (21%), Positives = 31/75 (41%)
Frame = +3
Query: 342 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHFPRWRHRVRYGHPPHLKIRE 521
G W +G + L + +SE+ + F ++R +YG PP K+++
Sbjct: 519 GGAWKQGKSESVSSLTTPGFHPIMVKSENLPVEKPFHNIKIASDKNRSKYGRPPAKKVKD 578
Query: 522 EYPDRIMNTYSVVPS 566
P + + + PS
Sbjct: 579 RKPATRLASNANTPS 593
>At5g12970.1 68418.m01487 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 769
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +3
Query: 471 WRHRVRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 617
W R R HPPH+ R +PD + + P+ + S+ V Y+ S+
Sbjct: 627 WNFRWRPRHPPHMDTRLSHADAVHPDELDEEFDTFPTSRSSEIVRMRYDRLRSI 680
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -3
Query: 410 DYIEDRVNELSTLCVVSLGPVVASAGLSEDEVVRTEDLSERSRADRVHGAGLKSTRMA 237
D IE+ + EL+ L V G + ++ AD++HG LK TR +
Sbjct: 92 DLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQS 149
>At1g04150.1 68414.m00405 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1012
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +3
Query: 471 WRHRVRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 617
WR R R +PPH+ R +PD + + P+ + D V Y+ S+
Sbjct: 870 WRFRRRSRYPPHMDARISHAETVFPDELDEEFDTFPTSRGFDVVRMRYDRVRSI 923
>At4g25800.1 68417.m03712 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 601
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 498 PPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS 614
P L I + P + +YS VP + + +E YN TL+
Sbjct: 386 PERLDISQTDPVTALASYSTVPLSQFPEFAIEGYNQTLT 424
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +2
Query: 437 PTGLPTYTFPSVAAPGPVWAPSSSKDP*RVPRQNHEHILSSPLAQSIRHCRRTIQCDSLS 616
P +P P PG WA S+ D + N + S + ++ + ++ ++
Sbjct: 191 PDKVPVQPIPVSILPGTDWALVSTNDGKKYYYNNKTKVSSWQIPAEVKDFGKKLEERAME 250
Query: 617 SPAS*KHRRNLLHRQTRLYTTSASALSNCPHPPMVTLTT*FPS 745
S AS +L + + L + SA A+SN TT F S
Sbjct: 251 SVAS-VPSADLTEKGSDLTSLSAPAISNGGRDAASLKTTNFGS 292
>At2g44070.1 68415.m05481 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|Q63186 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Rattus
norvegicus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 307
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 46 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNEASGG 222
YK E V L C N++G IS HG + +G ++ +L+ +N+ Y +A+
Sbjct: 213 YKFHEKVQLDYSICSNELGDP--NAISKVHGREDINYLNGLTNNAKLKFLNLMY-DATPS 269
Query: 223 KYVPRAILVDLSPAPWT 273
Y+ I+ D P T
Sbjct: 270 DYI-SMIITDYGMVPPT 285
>At1g57700.1 68414.m06548 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 686
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 278 PLWTFRTDLPSGQLRLRTVRRWQQLGQGTLHR 373
P++T + P+G +LRT R + Q G G L R
Sbjct: 531 PIYTNGDNHPNGSSQLRTQRSYVQRGSGQLSR 562
>At5g26180.2 68418.m03115 NOL1/NOP2/sun family protein similar to
NOL1R [Homo sapiens] GI:16226071; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 567
Score = 27.5 bits (58), Expect = 10.0
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 405 VVRKESESCDCLQGFQLTHFPRWRHRVRYGHPPHLKIR-EEYPDRIMNTYSVVPSPKVSD 581
+VRK+ +S D L G +LT + RY LK+ + + Y+V V D
Sbjct: 210 LVRKKVDSVDQLLGSKLTG----HLKPRYVRVNTLKMDVDSAVQELEKHYTVQKDETVPD 265
Query: 582 TVVEPYNATLSVHQLVEN 635
+V P + L H+LV N
Sbjct: 266 LLVLPPGSDLHAHRLVAN 283
>At5g26180.1 68418.m03114 NOL1/NOP2/sun family protein similar to
NOL1R [Homo sapiens] GI:16226071; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 567
Score = 27.5 bits (58), Expect = 10.0
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 405 VVRKESESCDCLQGFQLTHFPRWRHRVRYGHPPHLKIR-EEYPDRIMNTYSVVPSPKVSD 581
+VRK+ +S D L G +LT + RY LK+ + + Y+V V D
Sbjct: 210 LVRKKVDSVDQLLGSKLTG----HLKPRYVRVNTLKMDVDSAVQELEKHYTVQKDETVPD 265
Query: 582 TVVEPYNATLSVHQLVEN 635
+V P + L H+LV N
Sbjct: 266 LLVLPPGSDLHAHRLVAN 283
>At4g27300.1 68417.m03917 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 815
Score = 27.5 bits (58), Expect = 10.0
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 393 SVLDVVRKESESCDCLQGFQLTHFPRWR-HRVRYGHPPHLKIREEYPDRIMNTYSVVPSP 569
+V + K + SC CLQGF+ +W R YG + E D + P
Sbjct: 302 AVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVK----FPGL 357
Query: 570 KVSDTVVEPYNA 605
K+ DT Y+A
Sbjct: 358 KLPDTSWSWYDA 369
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 646 PTASTNEALYDICFRT-LKLSTPTYGDLNHLVSL 744
P +A+ ICF +L P YG ++H+VSL
Sbjct: 67 PEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSL 100
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 10.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 58 EIVHLQAGQCGNQIGAKFWEIISD 129
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,846
Number of Sequences: 28952
Number of extensions: 376394
Number of successful extensions: 1156
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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