Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0298X.Seq
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.072
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.072
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.072
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.072
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.3  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 23  FTMAKPIDLHNRXALGVGYASVGLQHSRSAVLHAQVPPQYRTVMPPHALLN 175
           F+ A P++L    ++ +  A+ GL++      H  +PP      PP   LN
Sbjct: 406 FSYAFPVNLTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPVVFLN 456


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 23  FTMAKPIDLHNRXALGVGYASVGLQHSRSAVLHAQVPPQYRTVMPPHALLN 175
           F+ A P++L    ++ +  A+ GL++      H  +PP      PP   LN
Sbjct: 406 FSYAFPVNLTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPVVFLN 456


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 23  FTMAKPIDLHNRXALGVGYASVGLQHSRSAVLHAQVPPQYRTVMPPHALLN 175
           F+ A P++L    ++ +  A+ GL++      H  +PP      PP   LN
Sbjct: 406 FSYAFPVNLTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPVVFLN 456


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 23  FTMAKPIDLHNRXALGVGYASVGLQHSRSAVLHAQVPPQYRTVMPPHALLN 175
           F+ A P++L    ++ +  A+ GL++      H  +PP      PP   LN
Sbjct: 406 FSYAFPVNLTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPVVFLN 456


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 204 HRGHACTSSCNRRLSFLEEEISAV 275
           HR     SS NRR  F+   I+ +
Sbjct: 262 HRFSTMVSSANRRREFIRSAITFI 285


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 252 GMIVCGCSLKCTRGPCACGTFPLEALLRSA*GGITV 145
           G+++    +   RG C  G +PL   +R    G  V
Sbjct: 853 GIMIWSVDMDDFRGSCGSGKYPLINAMRQELEGYKV 888


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 75  PTPNAXLLCRSIGFAIVN 22
           P PN  L C  + F +V+
Sbjct: 167 PLPNVILACHMLSFLMVH 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,342
Number of Sequences: 336
Number of extensions: 2189
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)