Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0298X.Seq
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           28   0.21 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.48 
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    26   0.63 
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    26   0.63 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    26   0.63 
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    26   0.83 
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    25   1.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.5  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    25   1.5  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   2.5  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    24   2.5  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    24   2.5  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    24   2.5  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    24   2.5  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    24   2.5  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    24   2.5  

>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +2

Query: 8   VHAKEFTMAKPIDLHNRXALGVGYASVGLQHSRSAVLHAQVPPQYRTVMPPHALLNSASS 187
           VH  +  +   + + +R A   G AS G  HS S+ L+ +VP ++ T  P HA  + A+S
Sbjct: 25  VHPSQPPVPMLVPIPSRTA-STGSASSG--HSGSSSLYDRVPREHATSSPYHAPPSPANS 81

Query: 188 GNVP 199
              P
Sbjct: 82  HYEP 85


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 26.6 bits (56), Expect = 0.48
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 208 GATRALQAATADYHSWKKKSPPSSLTNGNGKSIRPQSFTPGLKRSKSLTSADAL 369
           G  + +    + +HS     PP+ L NG GK  +  + T  L  + + T   AL
Sbjct: 466 GHEQGVSLFASHHHSTGDNKPPNLLINGRGKYFQRFAKTTPLTTTTTSTEEPAL 519


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +Q H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPTIQ-HVGSVHA-APAI 55


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +Q H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPAIQ-HVGSVHA-APAI 55


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +Q H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPTIQ-HVGSVHA-APAI 55


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 25.8 bits (54), Expect = 0.83
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHA 68
           HHGS+   H  +QH     +Q H    HA
Sbjct: 24  HHGSIATSHSTIQHHAAPAIQ-HVGSVHA 51


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHR-RPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH  RP +   H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHARPAI--QHVGSIHA-APAI 55


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +2

Query: 17  KEFTMAKPIDLHNRXALGVGYASVGLQHSRSAVLHAQVPPQ 139
           K    AK ID+     LGVGY  V L H R     ++VPP+
Sbjct: 362 KRAEFAKLIDIAEENELGVGY-QVVLSHLRG----SRVPPE 397



 Score = 22.6 bits (46), Expect = 7.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 204 ACGTFPLEALLRSA*GGITVLYWGG 130
           A  ++P++ +LRSA  GI     GG
Sbjct: 80  ATSSYPIQRVLRSAVPGIVAAQIGG 104


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +2

Query: 47  LHNRXALGVGYASVGLQH---SRSAVLHAQV-PPQYRTVMPPHALLNSASSGNVP 199
           LH   A+ +G  S+GL H      A LHA +  P  +      A + +A++  VP
Sbjct: 333 LHQMSAMSMGMGSMGLHHHHPGHHAALHAHLGVPTSQHHQLNQAAVAAAAASQVP 387


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIASSHSTIQHHAAPAIH-HVGSVHA-APAI 55


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 178 RLQRERATCTGATRALQAATADYHSW-KKKSPPSSLTNGNGKSI 306
           +++   A+ TG   A   A     S  KKK  P+SL   NG+S+
Sbjct: 137 KIRNASASTTGPPDAEANAPGSGSSLEKKKKKPNSLNAANGQSV 180


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPAIH-HVGSVHA-APAI 55


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPAIH-HVGSVHA-APAI 55


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPAIH-HVGSVHA-APAI 55


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIATSHSSIQHHAAPAIH-HVGSVHA-APAI 55


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPAIH-HVGSVHA-APAI 55


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 154 HHGSVLGRHLRVQHRRPGVLQSHTSVPHAQCPSI 53
           HHGS+   H  +QH     +  H    HA  P+I
Sbjct: 24  HHGSIATSHSTIQHHAAPAIH-HVGSVHA-APAI 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,555
Number of Sequences: 2352
Number of extensions: 10784
Number of successful extensions: 93
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)