Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0296X.Seq
         (346 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    22   5.6  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    22   5.6  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    21   9.7  

>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 GGATGFLEPFAELFKFTSE 93
           GG+ GF  P AEL + TS+
Sbjct: 386 GGSQGFDLPAAELARVTSQ 404


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 GGATGFLEPFAELFKFTSE 93
           GG+ GF  P AEL + TS+
Sbjct: 386 GGSQGFDLPAAELARVTSQ 404


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 171 KKREAELSKLRRDLEEANIQHEATLANLAR 260
           ++R AEL + +RDL+E   +++ T   + R
Sbjct: 646 QERCAELREQKRDLQEQLSKYQQTKMKVKR 675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,809
Number of Sequences: 2352
Number of extensions: 2244
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)