Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0294.Seq
         (848 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061259-1|AAL28807.1|  124|Drosophila melanogaster LD19086p pro...    30   3.5  
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro...    30   4.6  
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC...    30   4.6  
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA...    30   4.6  
AE014297-3991|AAF56619.1|   81|Drosophila melanogaster CG14244-P...    29   8.1  

>AY061259-1|AAL28807.1|  124|Drosophila melanogaster LD19086p
           protein.
          Length = 124

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 108 PVK*QELSKPLIAKAAKDSLSPPTDPLVLERPPP 7
           PV+ Q  S P + KAA    +PP  PL   R PP
Sbjct: 27  PVRHQRKSPPALKKAAVPRRTPPPWPLKFRRNPP 60


>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p protein.
          Length = 1664

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 81   PLIAKAAKDSLSP-PTDPLVLERPPPP 4
            PL++ A   S SP PT  L + +PPPP
Sbjct: 1078 PLLSTAPSPSASPKPTSTLAVSKPPPP 1104


>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
            isoform C protein.
          Length = 1664

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 81   PLIAKAAKDSLSP-PTDPLVLERPPPP 4
            PL++ A   S SP PT  L + +PPPP
Sbjct: 1078 PLLSTAPSPSASPKPTSTLAVSKPPPP 1104


>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
            isoform A protein.
          Length = 1674

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 81   PLIAKAAKDSLSP-PTDPLVLERPPPP 4
            PL++ A   S SP PT  L + +PPPP
Sbjct: 1088 PLLSTAPSPSASPKPTSTLAVSKPPPP 1114


>AE014297-3991|AAF56619.1|   81|Drosophila melanogaster CG14244-PA
           protein.
          Length = 81

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +2

Query: 590 YCLLPLKRTM*PSISTLIWFHYCNN*FRMPGKMRRSKGSAWTAWGWRQFRRPPA 751
           YCL P K  +  +I++    H C         +       WTAW W+  + PP+
Sbjct: 22  YCLDPTKYWLCSAINSQAHLHKCQPNTGFDQDLNACV--PWTAWEWKPCQEPPS 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,330,591
Number of Sequences: 53049
Number of extensions: 813475
Number of successful extensions: 2032
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)