Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0294.Seq
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 29 5.5
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 29 5.5
AF098985-6|AAY55852.1| 182|Caenorhabditis elegans Hypothetical ... 29 5.5
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 28 7.3
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 28 7.3
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 28 7.3
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 28 7.3
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 28 7.3
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 28 7.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.3
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 28 7.3
Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF099918-3|AAN63401.1| 436|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 362 VCERFNYYCEKVVKGFYKNHFLRFDRQIVLVD 457
VCER Y+C++V + + F ++DR I ++D
Sbjct: 144 VCERTAYFCDEVQQKEVGDLFHQYDRSIEIID 175
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 774 VLFSIVGMLICWWLRCNKKSAG-RH 797
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 1487 VLFSIVGMLICWWLRCNKKSAG-RH 1510
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical
protein C09D8.1c protein.
Length = 1216
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 523 VLFSIVGMLICWWLRCNKKSAG-RH 546
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 774 VLFSIVGMLICWWLRCNKKSAG-RH 797
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 1487 VLFSIVGMLICWWLRCNKKSAG-RH 1510
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 794 VLFSIVGMLICWWLRCNKKSAG-RH 817
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 417 IIFCALTARLCWWIACNLSTVGHRH 491
++F + +CWW+ CN + G RH
Sbjct: 1507 VLFSIVGMLICWWLRCNKKSAG-RH 1530
>AF098985-6|AAY55852.1| 182|Caenorhabditis elegans Hypothetical
protein C08G5.7 protein.
Length = 182
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -3
Query: 75 IAKAAKDSLSPPTDPLVL 22
+A +AK+SLSPP DP+V+
Sbjct: 106 LALSAKNSLSPPPDPMVM 123
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 60 KDSLSPPTDPLVLERPPPPV 1
++ ++PP P+V+ PPPPV
Sbjct: 463 REHVAPPPPPVVIPPPPPPV 482
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 60 KDSLSPPTDPLVLERPPPPV 1
++ ++PP P+V+ PPPPV
Sbjct: 643 REHVAPPPPPVVIPPPPPPV 662
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 60 KDSLSPPTDPLVLERPPPPV 1
++ ++PP P+V+ PPPPV
Sbjct: 660 REHVAPPPPPVVIPPPPPPV 679
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 60 KDSLSPPTDPLVLERPPPPV 1
++ ++PP P+V+ PPPPV
Sbjct: 715 REHVAPPPPPVVIPPPPPPV 734
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical
protein F23D12.5 protein.
Length = 867
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 559 GTGYAARSENFASAASVQTHIIKCLWPTVERLQAIHQHNLAVKAQKMILIEPL 401
GT + +S +FA +V ++ + + + IH HN++ KA ++ IEP+
Sbjct: 701 GTFHWVQSNDFA--INVSWNVAQPTFNQLAAAMVIHDHNISSKATTLMPIEPI 751
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 365 CERFNYYCEKVVKGFYKNHFLRFDRQIVL 451
CE F YCEKV++ K+ L FD Q+ +
Sbjct: 556 CE-FISYCEKVIEQLLKSRNLFFDEQVFI 583
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 597 CCH*SGPCDHRSAR*YGFITATTDSGC 677
CC S PC ++S R F T D C
Sbjct: 143 CCGCSSPCKYKSVRRAAFAAKTIDPSC 169
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 60 KDSLSPPTDPLVLERPPPPV 1
++ ++PP P+V+ PPPPV
Sbjct: 715 REHVAPPPPPVVIPPPPPPV 734
>Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 642 YGFITATTDSGCLAKCGVRRDQHGLPGAGVSSGDHQRHY*FNGEKIPALRGNRLS 806
+ F + T+ C K + HGLP + + +HQR + + K+ + RLS
Sbjct: 55 FTFTDSATEERCSRKRRRTQQTHGLPFSSPDAINHQRAFHLDEHKVCSKLTTRLS 109
>Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 642 YGFITATTDSGCLAKCGVRRDQHGLPGAGVSSGDHQRHY*FNGEKIPALRGNRLS 806
+ F + T+ C K + HGLP + + +HQR + + K+ + RLS
Sbjct: 55 FTFTDSATEERCSRKRRRTQQTHGLPFSSPDAINHQRAFHLDEHKVCSKLTTRLS 109
>AF099918-3|AAN63401.1| 436|Caenorhabditis elegans Hypothetical
protein H05C05.2a protein.
Length = 436
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 499 YASALTQLMQSFHYGQRTLFRRLFSPVIDKL-LFAATKADHVTIDQHANMVSLLQQLIQD 675
+ L Q S +TLF +P++D + L A + HV +D+H + S + +
Sbjct: 59 FVETLLQQPYSLEIKAKTLFLTS-APILDPVFLEALNQIAHVELDEHFRIASFCSKKSDE 117
Query: 676 AWQNAAFEG 702
+ FEG
Sbjct: 118 NGEQFKFEG 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,207,097
Number of Sequences: 27780
Number of extensions: 403168
Number of successful extensions: 934
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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