Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0294.Seq
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   8.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 344 FLY*SPVCERFNYYCEKVVKGF 409
           FLY SPV   +N Y  ++  G+
Sbjct: 619 FLYVSPVSSEYNQYNSRIWGGY 640


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 344 FLY*SPVCERFNYYCEKVVKGF 409
           FLY SPV   +N Y  ++  G+
Sbjct: 619 FLYVSPVSSEYNQYNSRIWGGY 640


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 281 LVNYFVCCLLSNRRSY*RMIIEIKQILF*PSGGLKY 174
           L+NYF+    ++   + R  IE+ ++L  P G  ++
Sbjct: 18  LINYFIFLYFNSLVRFRRFTIELDKVLESPRGKYEF 53


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +3

Query: 417 IIFCALTARLCWWIACNLSTVGH---RHLMICVCTDAADAKFSLRAAYPVPAFV 569
           ++F  +     W I      + H   R   + VC    DA + +  AYP+   V
Sbjct: 775 LVFVQILINGVWMIIDPAKAMHHYPTREDNLLVCNSYVDASYMIAFAYPIMLIV 828


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 702 DQHGLPGAGVSSGDH 746
           D HG+ GAG   GDH
Sbjct: 110 DVHGVIGAGHWIGDH 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,421
Number of Sequences: 438
Number of extensions: 4985
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)