Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0293.Seq
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical...    31   0.78 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    30   1.8  
Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical p...    29   4.2  
U49940-1|AAA93411.2|  435|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z82093-1|CAB05018.1|  229|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z75545-1|CAB61025.1|  665|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    28   9.6  
AB000913-1|BAA21715.1|  665|Caenorhabditis elegans UNC-14 protein.     28   9.6  

>AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical
           protein Y73F8A.20 protein.
          Length = 541

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 564 GNAVRVPPAAALVHWQGLRLGVMG-SVGGLWSGARQQTSMY 445
           G + + PP A+L HW  L++G  G S     +G + QT+++
Sbjct: 329 GQSQKAPPMASLWHWASLKVGSSGISANVKKNGEKSQTTLH 369


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = +3

Query: 693 GGSLIHPNVVLTAAHYVA 746
           GGSLI PN VLTAAH  A
Sbjct: 85  GGSLIDPNFVLTAAHCFA 102


>Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical
           protein Y57G11C.5 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 564 GNAVRVPPAAALVHWQGLRLGVMGSVGGL 478
           G + + PP A+L HW  LR+G  G  G +
Sbjct: 304 GQSQKAPPMASLWHWAHLRVGSEGIRGNV 332


>U49940-1|AAA93411.2|  435|Caenorhabditis elegans Hypothetical
           protein T24D11.1 protein.
          Length = 435

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 21/78 (26%), Positives = 39/78 (50%)
 Frame = -3

Query: 672 SVFGLVVIDWFNLEDGDHPGELSELGLAVHVARGPEGNAVRVPPAAALVHWQGLRLGVMG 493
           SV+G ++++W  +E    P  + +L     V RG       +P    ++ WQ L    + 
Sbjct: 83  SVWGELILNW-EIEVKKRPNYIKDL-----VKRG-------IPQHFRMIAWQNLSNASVS 129

Query: 492 SVGGLWSGARQQTSMYDE 439
           SV  L+S   +Q+S+Y++
Sbjct: 130 SVHDLYSDYMRQSSVYEK 147


>Z82093-1|CAB05018.1|  229|Caenorhabditis elegans Hypothetical
           protein ZK39.2 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -3

Query: 513 LRLGVMG-SVGGLWSGARQQTSMYDEH 436
           L L V+G S GG+W GAR+ T+   +H
Sbjct: 112 LALSVIGRSSGGIWLGARRTTACAKQH 138


>Z75545-1|CAB61025.1|  665|Caenorhabditis elegans Hypothetical
           protein K10D3.2 protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 720 PRSDGSASLPLRKRSASVFGLVVIDWFNLEDGDHPGELSELG 595
           PRS  S S   R R AS+ G   +  F+L DG+    LS  G
Sbjct: 596 PRSARSPSTTSRIRVASIMGDFTLANFSLSDGEKVSVLSTRG 637


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 365 CNAANNTIITDGTNVIDIRVGSGPCSSYID 454
           C +  ++I + G    ++ +  GPCS++ID
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID 130


>AB000913-1|BAA21715.1|  665|Caenorhabditis elegans UNC-14 protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 720 PRSDGSASLPLRKRSASVFGLVVIDWFNLEDGDHPGELSELG 595
           PRS  S S   R R AS+ G   +  F+L DG+    LS  G
Sbjct: 596 PRSARSPSTTSRIRVASIMGDFTLANFSLSDGEKVSVLSTRG 637


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,944,372
Number of Sequences: 27780
Number of extensions: 346514
Number of successful extensions: 1074
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)