Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0293.Seq
         (845 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    26   0.50 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   3.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   3.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 526 NQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILKV-EP 645
           N  CGW+NP  +   T       T   EFP M  I +  EP
Sbjct: 150 NCNCGWKNPSRIVGGT------NTGINEFPMMAGIKRTYEP 184


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 473 REPDSRRRCTMNTGHC 426
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 473 REPDSRRRCTMNTGHC 426
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,942
Number of Sequences: 438
Number of extensions: 3767
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)