Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0287.Seq
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 101 4e-22
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 40 0.001
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 33 0.16
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 31 0.63
Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 30 1.1
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 30 1.1
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 30 1.1
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 30 1.5
L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical pr... 29 1.9
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 2.6
Z46933-5|CAE17810.1| 74|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 3.4
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 3.4
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 3.4
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 3.4
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 3.4
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.4
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 3.4
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 28 4.5
L07143-2|AAB37087.3| 437|Caenorhabditis elegans Protein kinase ... 28 4.5
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 4.5
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 4.5
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF043704-5|AAK21474.1| 128|Caenorhabditis elegans Hypothetical ... 27 7.8
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 27 7.8
AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 101 bits (242), Expect = 4e-22
Identities = 43/77 (55%), Positives = 61/77 (79%)
Frame = +1
Query: 274 ELRKQQNNENLRRQFAEKANAVGPWIERQMDAVTAIGMGLQGSLEDQLRRLKEYEAGVYA 453
EL++QQNNE LR FAEKAN VGPW+ER+++ V AIG+G +G LED +++L+ + V
Sbjct: 627 ELKRQQNNERLRTIFAEKANQVGPWLERELEQVLAIGLGGRGRLEDAIQQLRSIQRNVLG 686
Query: 454 YKPHIEELERIHQAVQE 504
YKP+++ELER+HQ +QE
Sbjct: 687 YKPNLDELERVHQEMQE 703
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EDLVDMFIVHTIEEISGLMDAHARFKATLGEADKEYQAIVNLVHQVESIVKQHQIPGG-L 178
EDL D+ IVH + EI L++AH +FK+TLG+AD+E+ +I + H+VE +V H + L
Sbjct: 535 EDLADLVIVHEMREIEELVNAHDQFKSTLGDADREFSSINQIEHEVEHLVTSHGLDRELL 594
Query: 179 ENPYTTLTAHELNRKXSDVRQLVPQ 253
NPYT L+A ++ RK +V+ VP+
Sbjct: 595 RNPYTDLSASDIRRKWGEVQNSVPR 619
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 510 IFENRYSQYTMEALRVGWEQLLTSINRTINE 602
+FENR S+Y+ME+LRVGWE LLTSIN+TINE
Sbjct: 706 VFENRKSRYSMESLRVGWETLLTSINKTINE 736
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 101 bits (242), Expect = 4e-22
Identities = 43/77 (55%), Positives = 61/77 (79%)
Frame = +1
Query: 274 ELRKQQNNENLRRQFAEKANAVGPWIERQMDAVTAIGMGLQGSLEDQLRRLKEYEAGVYA 453
EL++QQNNE LR FAEKAN VGPW+ER+++ V AIG+G +G LED +++L+ + V
Sbjct: 653 ELKRQQNNERLRTIFAEKANQVGPWLERELEQVLAIGLGGRGRLEDAIQQLRSIQRNVLG 712
Query: 454 YKPHIEELERIHQAVQE 504
YKP+++ELER+HQ +QE
Sbjct: 713 YKPNLDELERVHQEMQE 729
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EDLVDMFIVHTIEEISGLMDAHARFKATLGEADKEYQAIVNLVHQVESIVKQHQIPGG-L 178
EDL D+ IVH + EI L++AH +FK+TLG+AD+E+ +I + H+VE +V H + L
Sbjct: 561 EDLADLVIVHEMREIEELVNAHDQFKSTLGDADREFSSINQIEHEVEHLVTSHGLDRELL 620
Query: 179 ENPYTTLTAHELNRKXSDVRQLVPQ 253
NPYT L+A ++ RK +V+ VP+
Sbjct: 621 RNPYTDLSASDIRRKWGEVQNSVPR 645
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 510 IFENRYSQYTMEALRVGWEQLLTSINRTINE 602
+FENR S+Y+ME+LRVGWE LLTSIN+TINE
Sbjct: 732 VFENRKSRYSMESLRVGWETLLTSINKTINE 762
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 46/84 (54%)
Frame = +2
Query: 2 EDLVDMFIVHTIEEISGLMDAHARFKATLGEADKEYQAIVNLVHQVESIVKQHQIPGGLE 181
EDL D +++EEI L DAH F+ +L A+++++ + +L +++S + P
Sbjct: 2072 EDLTDPVRCNSLEEIRALRDAHGEFQRSLSSAEEDFRQLQDLDRRIKSF---NVGP---- 2124
Query: 182 NPYTTLTAHELNRKXSDVRQLVPQ 253
NPYT T L ++++++ +
Sbjct: 2125 NPYTWFTMDALEDTWRNLQRIIKE 2148
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 274 ELRKQQNNENLRRQFAEKANAVGPWIERQMDAVTAIGMGLQGSLEDQLRRLKEYEAGVYA 453
E ++Q+ N+ LRR+FA+ ANA W+ + G G+LE+QL ++ + A
Sbjct: 2156 EHQRQEENDKLRREFAKLANAFHAWLTNTRQEMMEAG----GTLEEQLDAVERKAKEIKA 2211
Query: 454 YKPHIEELE 480
K + ++E
Sbjct: 2212 NKGQLRQIE 2220
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 252 SRRDAGRRASQ-ATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGPAGLSGRPAAQT* 428
++R A +R SQ +T+ R+ ++ RR+ RSR R R ++G + S T
Sbjct: 25 AKRPANQRKSQRSTKSRKSSRRSRRRNGRSRKSSRSGKSSR-SSKSGRSSKSSNSTKTTG 83
Query: 429 RVRSWSVRLQATHRGTR--THPPGCPGRQI 512
S S R Q +++ + T+P G R+I
Sbjct: 84 SKSSKSSRSQRSNKSNKMVTNPKGFSDRKI 113
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHR 383
R+ D RR S++ +R RR+ R R DR+ D RR R R
Sbjct: 265 RNGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDR 309
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAKAVRRKGQRSRTL--DREADGRRHRHRN 386
R +D R+ S++ ++R +K+ RK +RSR+ DR+ D +R R R+
Sbjct: 337 RDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRS 384
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHR 383
R+ D RR S++ +R RR+ R R DR+ D RR R R
Sbjct: 265 RNGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDR 309
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAKAVRRKGQRSRTL--DREADGRRHRHRN 386
R +D R+ S++ ++R +K+ RK +RSR+ DR+ D +R R R+
Sbjct: 337 RDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRS 384
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +3
Query: 252 SRRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGPAGLSGRPAAQT*R 431
S+R R SQ + +R + VRR +SR+ R R R R+ S PA++ R
Sbjct: 144 SQRRRRRSDSQESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSKSPASRNGR 203
Query: 432 VRSWSVRLQATHR 470
V R Q R
Sbjct: 204 VSRHRSRSQNRSR 216
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +3
Query: 252 SRRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGPAGLSGRPAAQT*R 431
S+R R SQ + +R + VRR +SR+ R R R R+ S PA++ R
Sbjct: 144 SQRRRRRSDSQESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRSVSRSKSPASRNGR 203
Query: 432 VRSWSVRLQATHR 470
V R Q R
Sbjct: 204 VSRHRSRSQNRSR 216
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 279 SQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGPAGLSGRPAAQT*RVRSWSV 449
S +T R PA A G S + A G HR+ +G S RP A T +S++V
Sbjct: 10 SSSTYAR-PAAAAHSAGNNSSSSSSNAGGGDGYHRSNSSGSSTRPVAATRERKSYAV 65
>Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical
protein W08G11.3b protein.
Length = 511
Score = 30.7 bits (66), Expect = 0.84
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 261 DAGRRASQATEQREPA---KAVRRKGQRSRTLDREADGRRHRHRNGPAGLSGRPA 416
D+GRR+ + R+ K V R +RSRT R R RNG AG+ PA
Sbjct: 2 DSGRRSRSGSRDRDSRRRHKKVHRHKRRSRTRSRS----RSYERNGTAGIHINPA 52
>Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical
protein W08G11.3a protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 261 DAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGPAGLSGRPA 416
D+GRR+ + R+ + R K R + R R RNG AG+ PA
Sbjct: 2 DSGRRSRSGSRDRDSRR--RHKKHRHKRRSRTRSRSRSYERNGTAGIHINPA 51
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.1
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +3
Query: 105 NTRLSSTWYIKSNLLSSSTRSPAVWRTHTPLSQLMS*TASXR-T*GSWCRSRRDAGRRAS 281
+T LS Y++S S S +SPA R+ LS+ S T + R + S SRR +GR +
Sbjct: 291 STSLSKRRYLRSRSRSLS-KSPARRRSRH-LSRSGSRTPAQRHSRRSESTSRRRSGRHSR 348
Query: 282 QATEQREPAKAVRRKGQRSRTLDREADGRRHRHR 383
+ + VRR RSR+ + R R R
Sbjct: 349 SRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSR 382
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAK---AVRRKGQRSRTLDREADGRRHRHRN 386
R RDAGRR S+ R+ ++ R + R R ++ A+ RR +N
Sbjct: 336 RDSRDAGRRGSRRDRSRDRSRDRDRDRDRDNRDRYFEKSANSRREEEQN 384
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAKAVRRKGQRSRTLD----READGRRHRHRNGPAGLSG 407
R R D R + E+RE +G+R R + R+ D RR RH++ G
Sbjct: 431 RDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRSRHQDSQEASGG 487
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 249 RSRRDAGRRASQATEQREPAKAVRRKGQRSRTLD----READGRRHRHRNGPAGLSG 407
R R D R + E+RE +G+R R + R+ D RR RH++ G
Sbjct: 425 RDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRSRHQDSQEASGG 481
>L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical
protein K06H7.3 protein.
Length = 618
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 231 T*GSWCRSRRDAGRRASQATEQREPAKAVRRKGQRSRTLDRE 356
T G+W R+ ++ + TE++E +A R+K +++R ++E
Sbjct: 497 TAGNWARTHIPEPKKKVELTEEQEREQAERKKEKKARQKEKE 538
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/68 (35%), Positives = 29/68 (42%)
Frame = +1
Query: 1 RRSRGYVHRSYHRRNLRSHGRSRSLQGNPRRG*QRIPGYRQPGTSSRIYCQAAPDPRRFG 180
RRSR R RR R+ R R + PRR +R P R PG S + RR
Sbjct: 88 RRSRSR-DRGAPRRRSRTRSRDRR-RSPPRRRDRRTPPRRSPGRRSPPRSRLPGPERRDV 145
Query: 181 EPIHHSHS 204
P + HS
Sbjct: 146 MPFNPRHS 153
>Z46933-5|CAE17810.1| 74|Caenorhabditis elegans Hypothetical
protein F34H10.5 protein.
Length = 74
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 23 IVHTIEEISG--LMDAHARFKATLGEADKEYQAIVNLVHQVESIV 151
IVH IE I G + + A F+A L +EY+ I L +++ESI+
Sbjct: 21 IVHAIELIEGDTVRNERAPFEAKLEFYHQEYEEIKVLFNELESIL 65
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 WIERQMDAVT-AIGMGLQGSLEDQLRRLKEYEAGVYAYKPHIEELER 483
W+ RQ D + IGM +Q S D LRR+ E +K + +ER
Sbjct: 1275 WLSRQFDELEDEIGMTIQTSRADDLRRMNSTEWN--KWKTDLANIER 1319
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Frame = +2
Query: 140 ESIVKQHQIP---GGLENPYTTLTAHELNRKXSDVRQLVPQPTR--RWPQSFASNRTTRT 304
ES +QH+ P G + PY+ VR + P R + +T
Sbjct: 1139 ESSWRQHRNPIPYNGWQRPYSVDLGELPQGHTYQVRIVAKDPNRGNAYTSPVVQVQTQSQ 1198
Query: 305 CEGSSQKRPTQ---SDLGS---RGRWTPSPPSEWACRALW 406
C+ + ++ P S LG R +W P SEW C LW
Sbjct: 1199 CK-APRRAPADVQVSPLGPTQIRVQWAPLHESEWNCDRLW 1237
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Frame = +2
Query: 140 ESIVKQHQIP---GGLENPYTTLTAHELNRKXSDVRQLVPQPTR--RWPQSFASNRTTRT 304
ES +QH+ P G + PY+ VR + P R + +T
Sbjct: 1139 ESSWRQHRNPIPYNGWQRPYSVDLGELPQGHTYQVRIVAKDPNRGNAYTSPVVQVQTQSQ 1198
Query: 305 CEGSSQKRPTQ---SDLGS---RGRWTPSPPSEWACRALW 406
C+ + ++ P S LG R +W P SEW C LW
Sbjct: 1199 CK-APRRAPADVQVSPLGPTQIRVQWAPLHESEWNCDRLW 1237
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Frame = +2
Query: 140 ESIVKQHQIP---GGLENPYTTLTAHELNRKXSDVRQLVPQPTR--RWPQSFASNRTTRT 304
ES +QH+ P G + PY+ VR + P R + +T
Sbjct: 1139 ESSWRQHRNPIPYNGWQRPYSVDLGELPQGHTYQVRIVAKDPNRGNAYTSPVVQVQTQSQ 1198
Query: 305 CEGSSQKRPTQ---SDLGS---RGRWTPSPPSEWACRALW 406
C+ + ++ P S LG R +W P SEW C LW
Sbjct: 1199 CK-APRRAPADVQVSPLGPTQIRVQWAPLHESEWNCDRLW 1237
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Frame = +2
Query: 140 ESIVKQHQIP---GGLENPYTTLTAHELNRKXSDVRQLVPQPTR--RWPQSFASNRTTRT 304
ES +QH+ P G + PY+ VR + P R + +T
Sbjct: 1139 ESSWRQHRNPIPYNGWQRPYSVDLGELPQGHTYQVRIVAKDPNRGNAYTSPVVQVQTQSQ 1198
Query: 305 CEGSSQKRPTQ---SDLGS---RGRWTPSPPSEWACRALW 406
C+ + ++ P S LG R +W P SEW C LW
Sbjct: 1199 CK-APRRAPADVQVSPLGPTQIRVQWAPLHESEWNCDRLW 1237
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 WIERQMDAVT-AIGMGLQGSLEDQLRRLKEYEAGVYAYKPHIEELER 483
W+ RQ D + IGM +Q S D LRR+ E +K + +ER
Sbjct: 1275 WLSRQFDELEDEIGMTIQTSRADDLRRMNSTEWN--KWKTDLANIER 1319
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 258 RDAGRRASQATEQREPAKAVRRKGQRSRTLDREAD-GRRHRHRN 386
+ + ++ + +E++E + RK RSR+ DR+ D RR R R+
Sbjct: 863 KKSDEKSERKSEKKEKKRDKERKRSRSRSRDRDRDRSRRDRSRD 906
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 252 SRRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRN 386
SRR R S ++ E + R R R DR+ R+ RHR+
Sbjct: 2 SRRSRSRSRSPKRDREERKRREDRDRDRERKRDRKDRERKRRHRS 46
>L07143-2|AAB37087.3| 437|Caenorhabditis elegans Protein kinase
protein 31 protein.
Length = 437
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 185 PYTTLTAHELNRKXSDVRQLVPQPTRRWPQSFASNRTTRTCEGSSQKRPTQSDL 346
PY LTA+E+ ++ +D ++ P P+ A TR C + RPT SD+
Sbjct: 322 PYPGLTANEVAKQVTDGYRMPPHQLAA-PEVQAL--MTRCCAENPNDRPTMSDV 372
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 249 RSR-RDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHR 383
RSR RD RR+ +R +++ R+ +RSRT R R+R R
Sbjct: 1512 RSRSRDRARRSRSREHKRARSRSAERR-RRSRTRSRSRSRERYRSR 1556
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 249 RSR-RDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHR 383
RSR RD RR+ +R +++ R+ +RSRT R R+R R
Sbjct: 137 RSRSRDRARRSRSREHKRARSRSAERR-RRSRTRSRSRSRERYRSR 181
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 255 RRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGP 392
RR+ RR + R+ ++ R + R R++D R RH P
Sbjct: 375 RREPARRRRSSDNHRDRDRSYRDNNRDRRDNHRDSDRDRRRHDRSP 420
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 255 RRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGP 392
RR+ RR + R+ ++ R + R R++D R RH P
Sbjct: 375 RREPARRRRSSDNHRDRDRSYRDNNRDRRDNHRDSDRDRRRHDRSP 420
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 255 RRDAGRRASQATEQREPAKAVRRKGQRSRTLDREADGRRHRHRNGP 392
RR+ RR + R+ ++ R + R R++D R RH P
Sbjct: 306 RREPARRRRSSDNHRDRDRSYRDNNRDRRDNHRDSDRDRRRHDRSP 351
>AF043704-5|AAK21474.1| 128|Caenorhabditis elegans Hypothetical
protein W01B11.1 protein.
Length = 128
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/51 (21%), Positives = 27/51 (52%)
Frame = +2
Query: 227 SDVRQLVPQPTRRWPQSFASNRTTRTCEGSSQKRPTQSDLGSRGRWTPSPP 379
S+ ++ QP ++ +S + ++ + G +K+ T+ GS+ + + PP
Sbjct: 45 SEAKKFQVQPAKKASKSKSKSKDSSPSNGKEKKKRTKRSGGSKSKESSEPP 95
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
a protein.
Length = 1281
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 313 QFAEKANAVGPWIERQMDAVTAIGMGLQGSLEDQLRRLKEYEAGVYAYKPHIEELE 480
Q ++A ++R++ + G + SL +LRR KE++ V A + + +E
Sbjct: 387 QLKDQAQRESAMVQRELLMAEQVFEGDKSSLNHELRRQKEHQERVKAKEGDVRRIE 442
>AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical
protein ZK973.8 protein.
Length = 392
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 480 THPPGCPGRQIFENRYSQYTMEALR 554
THPPG P R F + YS A+R
Sbjct: 112 THPPGFPNRNGFNSGYSTPASGAVR 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,347,521
Number of Sequences: 27780
Number of extensions: 349461
Number of successful extensions: 1354
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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