Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0286.Seq
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    31   0.030
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   1.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.9  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 31.1 bits (67), Expect = 0.030
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +1

Query: 466 RTITETVYCRNTRQRLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGG 621
           R I + + C  T   + GGLE AL C  R+  +++  GF      + L+ GG
Sbjct: 136 RMIRKPLVCAITGYCVAGGLELALMCDLRVMEENAVLGFFNRRFGVPLIDGG 187


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +2

Query: 323 SGIEAAVIISGKPGCFIAGADIS-MIENCKTKEEVVS--LSKRGHEIFRRIEQ 472
           +G  + ++ + K G ++AGADI  MI + K+K   V+  + ++   I+  ++Q
Sbjct: 226 AGSGSLLVAAAKFGAYVAGADIDYMIVHGKSKPTRVNQKVREKDESIYANLQQ 278


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 605 PNMTSGSPNPVLESFTAMRYLHARAVSNPPP 513
           P+    S +PV      + +LH  A   PPP
Sbjct: 802 PHSALSSHSPVGAGSHHLHHLHHHAAQQPPP 832


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,225
Number of Sequences: 2352
Number of extensions: 13039
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)