Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0286.Seq
         (627 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181648-1|AAD55434.1|  783|Drosophila melanogaster BcDNA.GH1255...    97   2e-20
AE014134-1659|AAN10698.1|  744|Drosophila melanogaster CG4389-PC...    97   2e-20
AE014134-1658|AAN10697.1|  744|Drosophila melanogaster CG4389-PB...    97   2e-20
AE014134-1657|AAF52789.1|  783|Drosophila melanogaster CG4389-PA...    97   2e-20
AE013599-1551|AAF58477.2|  299|Drosophila melanogaster CG8778-PA...    46   6e-05
BT003259-1|AAO25016.1|  295|Drosophila melanogaster LD24265p pro...    37   0.019
AE013599-1780|AAF58327.1|  295|Drosophila melanogaster CG6543-PB...    37   0.019
AE013599-1779|AAF58326.1|  295|Drosophila melanogaster CG6543-PA...    37   0.019
BT011480-1|AAR99138.1|  287|Drosophila melanogaster RE09736p pro...    32   0.55 
AY052009-1|AAK93433.1|  385|Drosophila melanogaster LD47223p pro...    32   0.73 
AE014297-2024|AAF55181.2|  385|Drosophila melanogaster CG5044-PA...    32   0.73 
AE014297-2023|AAN13658.2|  386|Drosophila melanogaster CG5044-PB...    32   0.73 
AY061252-1|AAL28800.1|  280|Drosophila melanogaster LD18769p pro...    31   0.97 
AE014134-1725|AAF52830.2|  287|Drosophila melanogaster CG4592-PA...    31   0.97 
AE014134-1724|AAF52829.1|  280|Drosophila melanogaster CG4594-PA...    31   0.97 
AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA...    30   2.9  
BT025960-1|ABG02204.1|  433|Drosophila melanogaster IP16063p pro...    28   9.0  
AY075469-1|AAL68281.1|  354|Drosophila melanogaster RE28575p pro...    28   9.0  
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.    28   9.0  
AE014297-3310|AAF56122.1|  354|Drosophila melanogaster CG6763-PA...    28   9.0  
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB...    28   9.0  
AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC...    28   9.0  
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA...    28   9.0  

>AF181648-1|AAD55434.1|  783|Drosophila melanogaster BcDNA.GH12558
           protein.
          Length = 783

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 41/83 (49%), Positives = 60/83 (72%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VNSL ++V +E   ++ ++ETN  + +AV+ISGKPGCF+AGADI M+E C+T EE   +S
Sbjct: 72  VNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLIS 131

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
                +F R+E+S+KP +AAI G
Sbjct: 132 HGAQVMFDRMERSKKPIVAAISG 154



 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 33/38 (86%), Positives = 33/38 (86%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGGLE ALAC YRIA KDSKT  GLPEVMLGLLPGGG
Sbjct: 157 LGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGG 194



 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 180 PASQVHTKCKLVNGVYVVTLDSPNVK 257
           P +  H   K+VNGV V+ +DSPN K
Sbjct: 46  PVANKHLHTKVVNGVLVIKIDSPNAK 71


>AE014134-1659|AAN10698.1|  744|Drosophila melanogaster CG4389-PC,
           isoform C protein.
          Length = 744

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 41/83 (49%), Positives = 60/83 (72%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VNSL ++V +E   ++ ++ETN  + +AV+ISGKPGCF+AGADI M+E C+T EE   +S
Sbjct: 33  VNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLIS 92

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
                +F R+E+S+KP +AAI G
Sbjct: 93  HGAQVMFDRMERSKKPIVAAISG 115



 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 33/38 (86%), Positives = 33/38 (86%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGGLE ALAC YRIA KDSKT  GLPEVMLGLLPGGG
Sbjct: 118 LGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGG 155



 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 180 PASQVHTKCKLVNGVYVVTLDSPNVK 257
           P +  H   K+VNGV V+ +DSPN K
Sbjct: 7   PVANKHLHTKVVNGVLVIKIDSPNAK 32


>AE014134-1658|AAN10697.1|  744|Drosophila melanogaster CG4389-PB,
           isoform B protein.
          Length = 744

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 41/83 (49%), Positives = 60/83 (72%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VNSL ++V +E   ++ ++ETN  + +AV+ISGKPGCF+AGADI M+E C+T EE   +S
Sbjct: 33  VNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLIS 92

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
                +F R+E+S+KP +AAI G
Sbjct: 93  HGAQVMFDRMERSKKPIVAAISG 115



 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 33/38 (86%), Positives = 33/38 (86%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGGLE ALAC YRIA KDSKT  GLPEVMLGLLPGGG
Sbjct: 118 LGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGG 155



 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 180 PASQVHTKCKLVNGVYVVTLDSPNVK 257
           P +  H   K+VNGV V+ +DSPN K
Sbjct: 7   PVANKHLHTKVVNGVLVIKIDSPNAK 32


>AE014134-1657|AAF52789.1|  783|Drosophila melanogaster CG4389-PA,
           isoform A protein.
          Length = 783

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 41/83 (49%), Positives = 60/83 (72%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VNSL ++V +E   ++ ++ETN  + +AV+ISGKPGCF+AGADI M+E C+T EE   +S
Sbjct: 72  VNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLIS 131

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
                +F R+E+S+KP +AAI G
Sbjct: 132 HGAQVMFDRMERSKKPIVAAISG 154



 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 33/38 (86%), Positives = 33/38 (86%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGGLE ALAC YRIA KDSKT  GLPEVMLGLLPGGG
Sbjct: 157 LGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGG 194



 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 180 PASQVHTKCKLVNGVYVVTLDSPNVK 257
           P +  H   K+VNGV V+ +DSPN K
Sbjct: 46  PVANKHLHTKVVNGVLVIKIDSPNAK 71


>AE013599-1551|AAF58477.2|  299|Drosophila melanogaster CG8778-PA
           protein.
          Length = 299

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 26/83 (31%), Positives = 43/83 (51%)
 Frame = +2

Query: 260 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 439
           NS +  ++E  ++++ +I+ ++G    V+ S  PG F AGAD+   +   T EE     K
Sbjct: 61  NSFSRGMVETFNDVLEDIKKDNGSRVVVLRSLSPGIFCAGADLKERKG-MTPEEATEFVK 119

Query: 440 RGHEIFRRIEQSRKPYIAAIQGS 508
               +   IEQ   P IAA+ G+
Sbjct: 120 ELRGLLIAIEQLPMPVIAAVDGA 142



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 21/38 (55%), Positives = 24/38 (63%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGGLE ALAC  R A  D+K   GL E  L ++PG G
Sbjct: 144 LGGGLEMALACDIRTAASDTK--MGLVETRLAIIPGAG 179


>BT003259-1|AAO25016.1|  295|Drosophila melanogaster LD24265p
           protein.
          Length = 295

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGG E A+ C   I     K  FG PE+ LG +PG G
Sbjct: 144 LGGGCELAMMCD--IIYAGDKAKFGQPEIALGTIPGAG 179


>AE013599-1780|AAF58327.1|  295|Drosophila melanogaster CG6543-PB,
           isoform B protein.
          Length = 295

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGG E A+ C   I     K  FG PE+ LG +PG G
Sbjct: 144 LGGGCELAMMCD--IIYAGDKAKFGQPEIALGTIPGAG 179


>AE013599-1779|AAF58326.1|  295|Drosophila melanogaster CG6543-PA,
           isoform A protein.
          Length = 295

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGG E A+ C   I     K  FG PE+ LG +PG G
Sbjct: 144 LGGGCELAMMCD--IIYAGDKAKFGQPEIALGTIPGAG 179


>BT011480-1|AAR99138.1|  287|Drosophila melanogaster RE09736p
           protein.
          Length = 287

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 21/83 (25%), Positives = 40/83 (48%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VN+L  ++M ++ + +N+IE+N      ++ S     F AG D++ + N    E +    
Sbjct: 55  VNTLTMELMHDLIDSINQIESNKS-RGLILTSSNDKVFSAGLDLNEMLNTDV-ERLRLFW 112

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
            R  +++  +     P  AAI G
Sbjct: 113 TRFQDLWLALHLCGLPTAAAING 135


>AY052009-1|AAK93433.1|  385|Drosophila melanogaster LD47223p
           protein.
          Length = 385

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGG+  ++  KYR+A    +T F +PE  +GL P  G
Sbjct: 148 MGGGVGLSVHGKYRVA--SDRTLFAMPETAIGLFPDVG 183



 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +2

Query: 263 SLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPG-CFIAGADISMIENCKTKEEVVSLSK 439
           +LN   +E V  I   ++     ++ VII G     F AG D+  +      +E  S  +
Sbjct: 64  ALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFCAGGDVRALVEAGPTDESKSFFR 123

Query: 440 RGHEIFRRIEQSRKPYIAAIQG 505
             +     I   + PYIA I G
Sbjct: 124 EEYSTNALIGNYKIPYIAIIDG 145


>AE014297-2024|AAF55181.2|  385|Drosophila melanogaster CG5044-PA,
           isoform A protein.
          Length = 385

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGG+  ++  KYR+A    +T F +PE  +GL P  G
Sbjct: 148 MGGGVGLSVHGKYRVA--SDRTLFAMPETAIGLFPDVG 183



 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +2

Query: 263 SLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPG-CFIAGADISMIENCKTKEEVVSLSK 439
           +LN   +E V  I   ++     ++ VII G     F AG D+  +      +E  S  +
Sbjct: 64  ALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFCAGGDVRALVEAGPTDESKSFFR 123

Query: 440 RGHEIFRRIEQSRKPYIAAIQG 505
             +     I   + PYIA I G
Sbjct: 124 EEYSTNALIGNYKIPYIAIIDG 145


>AE014297-2023|AAN13658.2|  386|Drosophila melanogaster CG5044-PB,
           isoform B protein.
          Length = 386

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGG+  ++  KYR+A    +T F +PE  +GL P  G
Sbjct: 149 MGGGVGLSVHGKYRVA--SDRTLFAMPETAIGLFPDVG 184



 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +2

Query: 263 SLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPG-CFIAGADISMIENCKTKEEVVSLSK 439
           +LN   +E V  I   ++     ++ VII G     F AG D+  +      +E  S  +
Sbjct: 65  ALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAFCAGGDVRALVEAGPTDESKSFFR 124

Query: 440 RGHEIFRRIEQSRKPYIAAIQG 505
             +     I   + PYIA I G
Sbjct: 125 EEYSTNALIGNYKIPYIAIIDG 146


>AY061252-1|AAL28800.1|  280|Drosophila melanogaster LD18769p
           protein.
          Length = 280

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VNS N Q++ ++   ++EIE N      ++ S     F AG DI  + N    E + ++ 
Sbjct: 46  VNSQNVQLLLDLQTSISEIENNKS-RGLILTSASSNVFSAGLDIFEMYNTDV-ERLRTVW 103

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
                ++  +  +  P  AAI G
Sbjct: 104 TELQNVWIALYGTTLPTAAAING 126


>AE014134-1725|AAF52830.2|  287|Drosophila melanogaster CG4592-PA
           protein.
          Length = 287

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 21/83 (25%), Positives = 40/83 (48%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VN+L  ++M ++ + +N+IE+N      ++ S     F AG D++ + N    E +    
Sbjct: 55  VNTLTMELMHDLIDSINQIESNKS-RGLILTSSNDKVFSAGLDLNEMLN-PDVERLRLFW 112

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
            R  +++  +     P  AAI G
Sbjct: 113 TRFQDLWLALHLCGLPTAAAING 135


>AE014134-1724|AAF52829.1|  280|Drosophila melanogaster CG4594-PA
           protein.
          Length = 280

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +2

Query: 257 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLS 436
           VNS N Q++ ++   ++EIE N      ++ S     F AG DI  + N    E + ++ 
Sbjct: 46  VNSQNVQLLLDLQTSISEIENNKS-RGLILTSASSNVFSAGLDIFEMYNTDV-ERLRTVW 103

Query: 437 KRGHEIFRRIEQSRKPYIAAIQG 505
                ++  +  +  P  AAI G
Sbjct: 104 TELQNVWIALYGTTLPTAAAING 126


>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
            protein.
          Length = 1427

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +2

Query: 179  SSKPSTYKMQIGQWSLRSHFGLSKC*VNSLNTQVMEEVSNIVNEIETNSGIEAA 340
            +S PST KM + +  ++S F   K      NT+  EE+SN +    TN+   AA
Sbjct: 1059 NSNPSTLKMDLAK-GIKSFFSRDKRSATEKNTEANEEISNPLE--RTNAAAIAA 1109


>BT025960-1|ABG02204.1|  433|Drosophila melanogaster IP16063p
           protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 623 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 513
           PPPG  P    G P P   +     +LH +   +PPP
Sbjct: 73  PPPGSGPG---GPPGPDPAAVMHYHHLHQQQQQHPPP 106


>AY075469-1|AAL68281.1|  354|Drosophila melanogaster RE28575p
           protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 626 LPPPGKSPNMTSGSPNPVLESF 561
           LP P  +P   +GS NP+++SF
Sbjct: 314 LPAPAPAPGAPAGSGNPIVDSF 335


>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
          Length = 2715

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 623 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 513
           PPPG  P    G P P   +     +LH +   +PPP
Sbjct: 72  PPPGSGPG---GPPGPDPAAVMHYHHLHQQQQQHPPP 105


>AE014297-3310|AAF56122.1|  354|Drosophila melanogaster CG6763-PA
           protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 626 LPPPGKSPNMTSGSPNPVLESF 561
           LP P  +P   +GS NP+++SF
Sbjct: 314 LPAPAPAPGAPAGSGNPIVDSF 335


>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
           isoform B protein.
          Length = 2716

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 623 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 513
           PPPG  P    G P P   +     +LH +   +PPP
Sbjct: 73  PPPGSGPG---GPPGPDPAAVMHYHHLHQQQQQHPPP 106


>AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC,
           isoform C protein.
          Length = 2556

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 623 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 513
           PPPG  P    G P P   +     +LH +   +PPP
Sbjct: 73  PPPGSGPG---GPPGPDPAAVMHYHHLHQQQQQHPPP 106


>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
           isoform A protein.
          Length = 2703

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 623 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 513
           PPPG  P    G P P   +     +LH +   +PPP
Sbjct: 73  PPPGSGPG---GPPGPDPAAVMHYHHLHQQQQQHPPP 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,217,023
Number of Sequences: 53049
Number of extensions: 550626
Number of successful extensions: 1456
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)