Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0286.Seq
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical ...    73   2e-13
AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical ...    73   2e-13
AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical ...    73   2e-13
Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical pr...    67   8e-12
AF045646-15|AAK29838.1|  284|Caenorhabditis elegans Enoyl-coa hy...    39   0.003
Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical pr...    35   0.041
AL132876-4|CAC48118.1|  256|Caenorhabditis elegans Hypothetical ...    34   0.096
Z54327-13|CAE48494.1|  619|Caenorhabditis elegans Hypothetical p...    31   0.51 
Z54307-9|CAE48498.1|  619|Caenorhabditis elegans Hypothetical pr...    31   0.51 
U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>AF000263-3|AAL77185.1|  697|Caenorhabditis elegans Hypothetical
           protein T08B2.7c protein.
          Length = 697

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = +2

Query: 260 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 439
           N LN  +  E+   +++++++  I++ V++SGKP  F+AGADI MI+   T     +LS+
Sbjct: 80  NVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATETLSR 139

Query: 440 RGHEIFRRIEQSRKPYIAAIQGS 508
            G E F RIE+S+KP +AAI GS
Sbjct: 140 EGQEQFFRIEKSQKPVVAAIMGS 162



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 29/38 (76%), Positives = 30/38 (78%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGGLE ALAC YRIAV D KT   LPEVMLGLLPG G
Sbjct: 164 MGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAG 201


>AF000263-2|AAK21464.1|  755|Caenorhabditis elegans Hypothetical
           protein T08B2.7b protein.
          Length = 755

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = +2

Query: 260 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 439
           N LN  +  E+   +++++++  I++ V++SGKP  F+AGADI MI+   T     +LS+
Sbjct: 54  NVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATETLSR 113

Query: 440 RGHEIFRRIEQSRKPYIAAIQGS 508
            G E F RIE+S+KP +AAI GS
Sbjct: 114 EGQEQFFRIEKSQKPVVAAIMGS 136



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 29/38 (76%), Positives = 30/38 (78%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGGLE ALAC YRIAV D KT   LPEVMLGLLPG G
Sbjct: 138 MGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAG 175


>AF000263-1|AAK21462.1|  781|Caenorhabditis elegans Hypothetical
           protein T08B2.7a protein.
          Length = 781

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = +2

Query: 260 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 439
           N LN  +  E+   +++++++  I++ V++SGKP  F+AGADI MI+   T     +LS+
Sbjct: 80  NVLNKALFAEMKATLDKLQSDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATETLSR 139

Query: 440 RGHEIFRRIEQSRKPYIAAIQGS 508
            G E F RIE+S+KP +AAI GS
Sbjct: 140 EGQEQFFRIEKSQKPVVAAIMGS 162



 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 29/38 (76%), Positives = 30/38 (78%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGGLE ALAC YRIAV D KT   LPEVMLGLLPG G
Sbjct: 164 MGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAG 201


>Z81043-1|CAB02799.1|  755|Caenorhabditis elegans Hypothetical
           protein C29F3.1 protein.
          Length = 755

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 32/83 (38%), Positives = 52/83 (62%)
 Frame = +2

Query: 260 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 439
           N LN  +  E++  ++ ++++  ++A V++SGKP  F+AGADI M +  KT   V +L +
Sbjct: 54  NVLNKALFAEMNETLDRLQSDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSNLLR 113

Query: 440 RGHEIFRRIEQSRKPYIAAIQGS 508
            G +    IE S+KP +AAI GS
Sbjct: 114 EGQKQLLTIELSQKPIVAAIMGS 136



 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGGLE ALAC YRIAV D KT  GLPEV LG++PG G
Sbjct: 138 MGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDG 175


>AF045646-15|AAK29838.1|  284|Caenorhabditis elegans Enoyl-coa
           hydratase protein 5 protein.
          Length = 284

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGGLE ALAC  R+A + +K   GL E    L+PG G
Sbjct: 137 LGGGLELALACDIRVASQKAK--MGLVETKWALIPGAG 172



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 28/119 (23%), Positives = 50/119 (42%)
 Frame = +2

Query: 260 NSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSK 439
           NSL    M++   +++E++ +      ++ S     F +GAD+       +++E      
Sbjct: 54  NSLGRVFMDQFREVLDELKYDPKTRVVILNSKCDNVFCSGADLKE-RKTMSQQEATRFVN 112

Query: 440 RGHEIFRRIEQSRKPYIAAIQGSV*EVD*RLLLHVNIALL*KTPKQGLDYQKSCWDFCP 616
              + F  +E+  +P IAAI G        L L  +I +  +  K GL   K  W   P
Sbjct: 113 GLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIRVASQKAKMGLVETK--WALIP 169


>Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical
           protein T05G5.6 protein.
          Length = 288

 Score = 35.1 bits (77), Expect = 0.041
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           LGGG E A+ C   I     K  FG PE+ +G +PG G
Sbjct: 137 LGGGNELAMMCD--IIYAGEKARFGQPEINIGTIPGAG 172


>AL132876-4|CAC48118.1|  256|Caenorhabditis elegans Hypothetical
           protein Y105E8A.4 protein.
          Length = 256

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +1

Query: 472 ITETVYCRNTRQRLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           IT+ V        LGGG E AL C   I        FG PE+ +G +PG G
Sbjct: 92  ITKPVIAAVNGFALGGGTELALMCD--IVYAGENAIFGQPEITIGTIPGLG 140


>Z54327-13|CAE48494.1|  619|Caenorhabditis elegans Hypothetical
           protein F14F11.1h protein.
          Length = 619

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 599 MTSGSPNPVLESFTAMRYLHARAVSNPPPRRCLVLRQYTVSVIV 468
           +T   P PV+ S  AM Y HA+A S  P +R  VL+ + +  +V
Sbjct: 500 LTIALPVPVIVSNFAMFYSHAQARSKLPKKRRRVLQPHEIKPVV 543


>Z54307-9|CAE48498.1|  619|Caenorhabditis elegans Hypothetical
           protein F14F11.1h protein.
          Length = 619

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 599 MTSGSPNPVLESFTAMRYLHARAVSNPPPRRCLVLRQYTVSVIV 468
           +T   P PV+ S  AM Y HA+A S  P +R  VL+ + +  +V
Sbjct: 500 LTIALPVPVIVSNFAMFYSHAQARSKLPKKRRRVLQPHEIKPVV 543


>U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical
           protein F09F7.4b protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGG   ++  ++R+A +  KT   +PE  LGL P  G
Sbjct: 124 MGGGCGLSVNGRFRVATE--KTMLAMPETALGLFPDVG 159


>U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical
           protein F09F7.4a protein.
          Length = 386

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 511 LGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGG 624
           +GGG   ++  ++R+A +  KT   +PE  LGL P  G
Sbjct: 147 MGGGCGLSVNGRFRVATE--KTMLAMPETALGLFPDVG 182


>Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical
           protein H25K10.6 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = +2

Query: 173 CRSSKPSTYKMQIGQWSLRSHFGLSKC*VNSLNTQVMEEVSNIVNEIE 316
           C  SK + Y  +  +W       L     +SLN  ++  + N+  ++E
Sbjct: 212 CDGSKITNYNAKFQKWQFLYELKLVNISYSSLNLSILSSIRNVRGDVE 259


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,521,505
Number of Sequences: 27780
Number of extensions: 280567
Number of successful extensions: 862
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)