Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0283.Seq
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.9  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -3

Query: 185 PRIRAICRLISLRGLVSVRDSFGWTRRATPRAARYLCSNHVRMSVMFNAFV 33
           PR   +  L  + G  S     GW      +  +YLC   +R+S++ N  V
Sbjct: 693 PRSAFLTDLKLMGGKWSCDCDLGWVEVWERKRRQYLCPVLLRVSILRNIIV 743


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 217 CGALSYYIFINIEL 258
           CGA S Y+FI I+L
Sbjct: 424 CGASSSYLFIMIQL 437



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -2

Query: 255 LNINKNVI*KSSTRSFMHSLHL 190
           +N++KN++  +   + ++SLHL
Sbjct: 234 VNLHKNLVKVAKDHNSLYSLHL 255


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +2

Query: 221 ELFHITFLLILSYA 262
           ++F I+FLLI+SY+
Sbjct: 198 DIFGISFLLIISYS 211


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 217 CGALSYYIFINIEL 258
           CGA S Y+FI ++L
Sbjct: 274 CGAASSYLFIMLQL 287


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +2

Query: 200 ECMKLRVELF-HITFLLILSYALRPTCYSR*LNKLKCFAMD 319
           +C+K  V +    TFLL   + L   CY    N   C+  D
Sbjct: 47  KCVKDSVPMTCRYTFLLEWYHTLSKACYDCPYNTQDCYRED 87


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 696 YYCNYYFVRFLVLGSLLQLVA*FINVL*LLCHNFNYSTTFIIF 568
           YY  Y F+ F V   LL  +  F  +  L C  F   T  ++F
Sbjct: 239 YYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLF 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,539
Number of Sequences: 336
Number of extensions: 3676
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)