Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0283.Seq
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   7.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.2  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   9.5  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -3

Query: 566 NVLYDAPETITYQLLIKIPL 507
           N ++D  + +TY+ ++K+P+
Sbjct: 666 NAVFDQLDLVTYEEVVKVPI 685


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 699  NYYCNYYFVRFLVLGSLLQLVA*FINVL*LLCHNFN 592
            N Y   YFV F++ GS   L   FI V   +  NFN
Sbjct: 1537 NIYMYLYFVFFIIFGSFFTLNL-FIGV---IIDNFN 1568


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 115 HPNESRTDTSPRKDIRRHMARIRGSEMERVHE 210
           H   SR     +K I+  +++  G+  ER+HE
Sbjct: 451 HIKTSRLGLEEQKRIKAELSQDVGTSKERIHE 482


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -3

Query: 212 VSCTRSISLPRIRAICRLISLRGLVSVRDSFGWTRRATPRAARYLCSNH 66
           ++ T   ++  + A   +   R   +VR     TR  TP+   Y  SNH
Sbjct: 95  LTMTSQNNVTELSATLEIYGFRQGKAVRSVGTDTRDCTPKTPEYTLSNH 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,766
Number of Sequences: 2352
Number of extensions: 13777
Number of successful extensions: 56
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)