Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0282.Seq
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    26   1.1  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    24   6.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   6.1  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    21   6.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    21   6.7  

>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 259 SAFHRTVLHLHHRDEQLSGH 200
           S+FH   L+++ RD+ LSGH
Sbjct: 101 SSFHDRGLYVNERDDPLSGH 120


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 456 CAFRTIFAGYREIYLPHRSP*CSQHQVRRDGCGSLWIH 343
           C F  ++    +IY  +++  C Q  V  + C  L+ H
Sbjct: 114 CTFSIVYRDCPDIYWNYQNDRCGQFVVALNNCHYLFRH 151


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 67  PPPRLGCRHPVRSVPT 20
           PPP +G R P   VPT
Sbjct: 110 PPPMMGMRPPPMMVPT 125


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 21.0 bits (42), Expect(2) = 6.7
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 234 CSTVL*KAEVTPPEDDPKQLFVAMTSDRGLCGAVHT 341
           CS +L         +   ++F ++ +D GLC   +T
Sbjct: 180 CSALLKACRYAKQPERCSEIFQSIFTDEGLCCTFNT 215



 Score = 20.6 bits (41), Expect(2) = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 162 EDGVSC*IHPC*A*PESC 215
           EDG  C   PC A  ++C
Sbjct: 170 EDGAGCATQPCSALLKAC 187


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 21.0 bits (42), Expect(2) = 6.7
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 234 CSTVL*KAEVTPPEDDPKQLFVAMTSDRGLCGAVHT 341
           CS +L         +   ++F ++ +D GLC   +T
Sbjct: 180 CSALLKACRYAKQPERCSEIFQSIFTDEGLCCTFNT 215



 Score = 20.6 bits (41), Expect(2) = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 162 EDGVSC*IHPC*A*PESC 215
           EDG  C   PC A  ++C
Sbjct: 170 EDGAECATQPCSALLKAC 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,091
Number of Sequences: 2352
Number of extensions: 18626
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)