Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0280.Seq
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical ...    29   3.3  
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    28   4.4  
U41274-2|AAD50512.1|  347|Caenorhabditis elegans Intracellular l...    28   4.4  
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ...    28   4.4  

>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
           protein F54D1.5 protein.
          Length = 1406

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -1

Query: 282 FRQVYLKVAAKTTAPISSSLLNTGCIRHSTPALD 181
           FR+  LK A  T A I +S L++G +RH   ALD
Sbjct: 220 FRKGMLKAAQTTGAWIITSGLDSGVVRHVAKALD 253


>U97002-10|AAB52266.1|  322|Caenorhabditis elegans Hypothetical
           protein K09H11.7 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 507 SLFIGDMIAQDVSLGKAVGFNTLLVLTG 590
           ++ IGD    DV  G+  G  TLLVL+G
Sbjct: 256 TMMIGDRTNTDVKFGRDHGMKTLLVLSG 283


>AF039035-3|AAB94163.1|  349|Caenorhabditis elegans Hypothetical
           protein C53A3.2 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 507 SLFIGDMIAQDVSLGKAVGFNTLLVLTG 590
           ++ IGD    DV  G+  G  TLLVL+G
Sbjct: 283 TMMIGDRTNTDVKFGRDHGMKTLLVLSG 310


>AF016421-1|AAC25793.1|  335|Caenorhabditis elegans Hypothetical
           protein F44E7.2 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 507 SLFIGDMIAQDVSLGKAVGFNTLLVLTG 590
           ++ IGD    DV  G+  G  TLLVL+G
Sbjct: 273 TMMIGDRTNTDVKFGRDHGMKTLLVLSG 300


>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
           protein 8 protein.
          Length = 1206

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 90  VTFNKTVYCVTCTETKRVLEAHGFKCKE 173
           +TFN  +Y   C ET+R+L  +G +  E
Sbjct: 10  LTFNVLIYLAACQETERILANNGTEDNE 37


>U41274-2|AAD50512.1|  347|Caenorhabditis elegans Intracellular
           lectin protein 2 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 149 STRIQMQGRSRSRAGVLWRIHPVFRSDEEI 238
           S +I++    +S+AG LW   PV+  D E+
Sbjct: 75  SNQIRLTADEQSKAGALWNTQPVWSRDWEL 104


>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1152

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 90  VTFNKTVYCVTCTETKRVLEAHGFKCKE 173
           +TFN  +Y   C ET+R+L  +G +  E
Sbjct: 10  LTFNVLIYLAACQETERILANNGTEDNE 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,854,423
Number of Sequences: 27780
Number of extensions: 260168
Number of successful extensions: 607
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)