Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0276.Seq
(646 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 185 3e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 185 3e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 4e-39
SB_54| Best HMM Match : Actin (HMM E-Value=0) 126 2e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 4e-26
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 110 8e-25
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 84 8e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 76 3e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 5e-09
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 36 0.037
SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 33 0.26
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 32 0.35
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.61
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.61
SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2) 31 1.1
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.4
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.9
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.9
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 30 1.9
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.9
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.4
SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 3.2
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 29 3.2
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 29 4.3
SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09) 29 4.3
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 4.3
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 29 4.3
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 28 5.7
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 28 5.7
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 28 7.5
SB_45501| Best HMM Match : Zona_pellucida (HMM E-Value=3.5e-25) 28 7.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 9.9
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 27 9.9
SB_33958| Best HMM Match : MAM (HMM E-Value=1.1e-32) 27 9.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 27 9.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_1261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 9.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 9.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 9.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (453), Expect = 1e-47
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 435
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 436 AVLSLYASGRTTGIVLDSGDGVSHTCP 516
AVLSLYASGRTTGIV+DSGDGVSHT P
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVP 165
Score = 159 bits (387), Expect = 1e-39
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +2
Query: 23 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 202
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 203 SKRGILTLKYPIEHGIV 253
SKRGILTLKYPIEHGIV
Sbjct: 61 SKRGILTLKYPIEHGIV 77
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 435
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 436 AVLSLYASGRTTGIVLDSGDGVSHTCP 516
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVP 165
Score = 159 bits (387), Expect = 1e-39
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = +2
Query: 23 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 202
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 203 SKRGILTLKYPIEHGIV 253
SKRGILTLKYPIEHGIV
Sbjct: 61 SKRGILTLKYPIEHGIV 77
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 626
VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 164 VPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFT 202
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 185 bits (450), Expect = 3e-47
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 435
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Query: 436 AVLSLYASGRTTGIVLDSGDGVSHTCP 516
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVP 164
Score = 157 bits (380), Expect = 1e-38
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 29 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 208
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 209 RGILTLKYPIEHGIV 253
RGILTLKYPIEHGIV
Sbjct: 62 RGILTLKYPIEHGIV 76
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 626
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 201
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 185 bits (450), Expect = 3e-47
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 435
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Query: 436 AVLSLYASGRTTGIVLDSGDGVSHTCP 516
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVP 164
Score = 158 bits (383), Expect = 4e-39
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +2
Query: 29 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 208
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 209 RGILTLKYPIEHGIV 253
RGILTLKYPIEHGIV
Sbjct: 62 RGILTLKYPIEHGIV 76
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 626
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 201
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 435
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 436 AVLSLYASGRTTGIVLDSGDGVSHTCP 516
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 6e-41
Identities = 75/77 (97%), Positives = 77/77 (100%)
Frame = +2
Query: 23 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 202
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 203 SKRGILTLKYPIEHGIV 253
SKRGILTLKYPIEHGIV
Sbjct: 61 SKRGILTLKYPIEHGIV 77
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 626
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 158 bits (383), Expect = 4e-39
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 29 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 208
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 209 RGILTLKYPIEHGIV 253
RGILTLKYPIEHGIV
Sbjct: 62 RGILTLKYPIEHGIV 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +1
Query: 367 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTCP 516
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVP 127
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 626
VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 126 VPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFT 164
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 126 bits (304), Expect = 2e-29
Identities = 57/81 (70%), Positives = 67/81 (82%)
Frame = +1
Query: 274 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 453
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 454 ASGRTTGIVLDSGDGVSHTCP 516
ASGRTTG V D GDGVSHT P
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVP 2209
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 623
VP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF
Sbjct: 2208 VPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 47 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 148
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 115 bits (276), Expect = 4e-26
Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 NWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 432
NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+AI
Sbjct: 81 NWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAI 140
Query: 433 QAVLSLYASGRTTGIVLDSGDGVSHTCP 516
QAVL+LYA G TG+V+DSGDGV+H CP
Sbjct: 141 QAVLTLYAQGLLTGVVIDSGDGVTHICP 168
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 214
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 215 ILTLKYPIEHGIV 253
+L + YP+++GIV
Sbjct: 67 MLEVNYPMDNGIV 79
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +3
Query: 513 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 623
P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F
Sbjct: 168 PVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAF 204
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 110 bits (265), Expect = 8e-25
Identities = 46/65 (70%), Positives = 59/65 (90%)
Frame = +1
Query: 322 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 501
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 502 SHTCP 516
SH+ P
Sbjct: 186 SHSVP 190
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 623
VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F
Sbjct: 189 VPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = +3
Query: 507 HVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 626
+VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFT
Sbjct: 41 NVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFT 80
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +1
Query: 388 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTCP 516
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVP 43
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 435
+WD EKI + + ++ HP+L++EA N + REK+T++MFE +N PA ++
Sbjct: 11 DWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKN 70
Query: 436 AVLSLYASGRTTGIVLDSG 492
+VL+ +A+GR+ G+V+DSG
Sbjct: 71 SVLTAFANGRSNGLVIDSG 89
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 608
VP+++GY L AI+R LAG +T ++ E
Sbjct: 96 VPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 32 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 148
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +2
Query: 17 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 187
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 188 GDEAQSKRGILTLKYPIEHGIVITGMT 268
GD A +K G++ L + + +GMT
Sbjct: 753 GDAAVAKSGVMHLN-QLSLSLYASGMT 778
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 433 QAVLSLYASGRTTGIVLDSG 492
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 145 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 29
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 277 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 456
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 457 SGRTTGIV 480
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 510 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 611
+P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 76 IPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 400 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTCP 516
++ T A+ + S RT TG V+DSGDGV+H P
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIP 77
>SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 395 SKHSTRPPCTSPSKPCSRC--TRPVVPPVSCWT-PATVSPTRAHLRRIRTPPRHPASG 559
S +S P TSP+ P + P + PV+C T P SPT+ R + PP P G
Sbjct: 179 SPNSQAPTTTSPTSPTPLLPPSAPPIQPVACPTSPTIASPTKLK-RELPHPPASPRKG 235
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLL 339
+WD ME+ W + LR PE+H LL
Sbjct: 309 DWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 469 TGIVLDSGDGVSHTCP 516
TG V+DSGDGV+H P
Sbjct: 356 TGCVIDSGDGVTHVIP 371
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 404 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TRAHLRRIRTPPRHPASGLSRSRPH 580
+T T+P+K S T+PV+ P + P T+ P + R + PP P R++P
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTPTTP-APMTLPPISPIDPPRTQPPPIFPIDP-PRTQPP 182
Query: 581 RLPHEDPHRAR 613
+P DP R +
Sbjct: 183 PIPPIDPPRTQ 193
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +2
Query: 413 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTPPRHPASGLSRSRPHRLP 589
PP +P+ P P PP PA P L PP PA + PH LP
Sbjct: 57 PPAAAPAAPPPPAAAPAAPPPPAAPPA-APPPPPPLPAPPPPPAQPAPQPPPAPPHFLP 114
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 120 GNTARGASSPAKPALHIPEPLSTT 49
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 364 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 480
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 120 GNTARGASSPAKPALHIPEPLSTT 49
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2)
Length = 334
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 470 PVSCWTPATVSPTRAHLR-RIRTPPRHPASGLSRSRPHRLPHEDPHRA 610
P + TP+T SPT R R + P R + + R+RP +P D RA
Sbjct: 190 PATPSTPSTPSPTSETPRPRPQPPKRSDSFNIKRNRPFIIPRGDNSRA 237
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = +2
Query: 410 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTPPRHPASGLSRSRPHRLP 589
RPP P P P +PP P V P RA +TPP +P S SR P P
Sbjct: 311 RPPTRIP--PPGMGPPPRIPPPPIRAPVDVYPPRAPQGASQTPP-YPGSHYSRVPPPDGP 367
Query: 590 H 592
+
Sbjct: 368 Y 368
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Frame = +2
Query: 413 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTP----PRHPASGLSRSR-- 574
P T P P + P VPP P P +H +R+R P PR P G R
Sbjct: 384 PGATHPRVPSPGASHPRVPPPGAPHPRVPPPGASH-QRVRPPGAPHPRVPPPGAPHPRFP 442
Query: 575 PHRLPH 592
P PH
Sbjct: 443 PPGAPH 448
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1
Query: 427 AIQAVLSLYASGRTTGIVLDSGDGVSHTCPSTKDTHSPTP 546
AIQ V A RTTGI LD G + TK H+PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELD-GRRIRVDYSVTKRAHTPTP 247
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 120 GNTARGASSPAKPALHIPEPLSTT 49
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 348 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 440
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 428 PSKPCSRCTRPVVPP 472
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 35 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 214
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 215 ILTLKY--PIEHGIVI 256
L Y P + G ++
Sbjct: 284 YSALFYVLPFQKGFLV 299
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 416 PCTSPS-KPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTPPR-HPASGLSRSRPHRLP 589
P T P+ P T P P T T +P R H+ RTP R H + PH P
Sbjct: 131 PHTDPTWTPHRPNTDPTRTPHGPHTDPTWTPHRPHMDPTRTPHRPHMDPTRTSHGPHTDP 190
Query: 590 HEDPH 604
+PH
Sbjct: 191 TRNPH 195
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = +2
Query: 398 KHSTRPPCTSPSKPCSRCTRP---VVPPVSCWTPATVSPTRAHLRRIRTPPRHPASGLSR 568
+ +T PC++ PCS P + P+ T T+ TR L R H L
Sbjct: 35 RSATLAPCSATLAPCSATLAPCSALTCPMLGHTRPTLGHTRPTLGHTRPTLGHTRPMLGH 94
Query: 569 SRPHRLPHEDP---HRARLL 619
+RP L H P H RL+
Sbjct: 95 TRP-MLGHTHPLLGHTCRLI 113
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 398 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTPPRHPA 553
+H +R P SP K R + W+P SP RR+ P R P+
Sbjct: 198 RHKSRSPFRSPQK--ERIPHQSPERLPSWSPVRQSPFNKTHRRLSPPRRSPS 247
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 395 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP--TRAHLRRIRTPPR-HPASGLS 565
S S PP ++PS T PPVS TP+ P T +H + TP P S S
Sbjct: 376 STPSNTPPVSTPSHTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 433
Query: 566 RSRPHRLPHEDP 601
+ P P P
Sbjct: 434 NTPPVSTPSHTP 445
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 395 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP--TRAHLRRIRTPPR-HPASGLS 565
S S PP ++PS T PPVS TP+ P T +H + TP P S S
Sbjct: 403 STPSHTPPVSTPSHTPPVSTPSHTPPVS--TPSNTPPVSTPSHTPPVSTPSHTPPVSTPS 460
Query: 566 RSRPHRLPHEDP 601
+ P P P
Sbjct: 461 HTPPVSTPSHTP 472
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 395 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP--TRAHLRRIRTPPR-HPASGLS 565
S S PP ++PS T PPVS TP+ P T +H + TP P S S
Sbjct: 421 STPSHTPPVSTPSNTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 478
Query: 566 RSRPHRLPHEDP 601
+ P P P
Sbjct: 479 HTPPVSTPSNTP 490
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 395 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP--TRAHLRRIRTPPR-HPASGLS 565
S S PP ++PS T PPVS TP+ P T +H + TP P S S
Sbjct: 430 STPSNTPPVSTPSHTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 487
Query: 566 RSRPHRLPHEDP 601
+ P P P
Sbjct: 488 NTPPVFTPSHTP 499
Score = 27.9 bits (59), Expect = 7.5
Identities = 31/103 (30%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Frame = +2
Query: 290 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 469
PS VS P NT S + T PP ++PS T P
Sbjct: 423 PSHTPPVSTPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHT-PPVSTPSHTPPVSTPSHTP 481
Query: 470 PVSCWTPATVSP--TRAHLRRIRTPPR-HPASGLSRSRPHRLP 589
PVS TP+ P T +H + TP P S S S P P
Sbjct: 482 PVS--TPSNTPPVFTPSHTPPVFTPSHTPPVSTPSNSPPVSTP 522
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 407 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTP 538
TR T +PCS TR V+P + W P R + ++ P
Sbjct: 1531 TRLLATKDFQPCSAKTRRVIPSFTVWRVRGRLPLRFWINIVKNP 1574
>SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09)
Length = 53
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 223 PQIPHRTRNRHNWD-----DMEKIWHHTFYNEL 306
P +P R R+R N+D ++EKI+HH Y ++
Sbjct: 3 PLLPKRRRSRTNFDSWQLEELEKIYHHNQYPDV 35
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 223 PQIPHRTRNRHNWD-----DMEKIWHHTFYNEL 306
P +P R R+R N+D ++EKI+HH Y ++
Sbjct: 315 PLLPKRRRSRTNFDSWQLEELEKIYHHNQYPDV 347
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -1
Query: 208 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 44
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 43 GNFFVAHLE 17
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 352 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 480
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +2
Query: 401 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP--TRAHLRRIRTPPRH 547
H+T+PP T P +KP + R PP + P T P T+ H + T H
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKPH 187
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 503 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 330
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 329 G 327
G
Sbjct: 147 G 147
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 413 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 508
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 120 GNTARGASSPAKPALHIPEPLSTT 49
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 120 GNTARGASSPAKPALHIPEPLSTT 49
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 401 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSP 505
H+T P P T PS P C + P C+T T+SP
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSP 699
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 413 PPCTSPSKPCSRCT---RPVVPPVSCWTPATVSPTRAHLRRIRTPPRHPASGLSRSRPHR 583
PP +PS S+ P++P TP R RR++TP + S P
Sbjct: 100 PPSKTPSSASSQAKVDKTPLLPSPPTNTPRPSRIPRLKRRRLQTPTKR-----STLPPIH 154
Query: 584 LPHEDPHRARLL 619
P +D H RLL
Sbjct: 155 SPPQDQHPGRLL 166
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = +2
Query: 416 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTRAHLRRIRTPPRHPASGLSRS--RPHRLP 589
PC P PC P V PV V P + + P + P+ S + RP
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPCVDPVKVPSESGSDTLCRPSESG 610
Query: 590 HEDPHR 607
+ P R
Sbjct: 611 SDTPCR 616
>SB_45501| Best HMM Match : Zona_pellucida (HMM E-Value=3.5e-25)
Length = 341
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 513 ARVGDTVAGVQHDTGGTTGRVQREHGLDGDV 421
A +GD+V G++ G RV+R+ +DG +
Sbjct: 221 AEIGDSVTGMRESVTGMRDRVRRDTVVDGSM 251
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 413 PPCTSPSKPCSRCTRPVVPPVSC 481
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 410 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 508
+PP T+PSK T P+ P++ TP T T
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKAT 411
>SB_33958| Best HMM Match : MAM (HMM E-Value=1.1e-32)
Length = 1052
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 541 WGSAYPS*MGTCGRHRRRS-PARYRWYD 461
WG + PS G CG R+ + P +RW D
Sbjct: 457 WGESEPSGDGMCGVLRKNTKPKTWRWND 484
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 135 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 25
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 401 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTR 511
H RPP S P +R T P P + PAT +PT+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTK 63
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_1261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = +2
Query: 500 SPTRAHLRRIRTPPR--HPA-----SGLSRSRPHRLPHEDPHRARLLVH*KPP 637
SP R HLR R PP HP SGL LP+ P R R++ PP
Sbjct: 24 SPQR-HLRSNRAPPHPSHPKGRSGRSGLRHPPTRTLPYLQPARHRVIDEAPPP 75
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 191 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 45
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 197 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 27
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 25 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 202 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 68
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,275,664
Number of Sequences: 59808
Number of extensions: 626570
Number of successful extensions: 2685
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 2241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2653
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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