Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0275.Seq
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5IMB7 Cluster: Metal dependent phosphohydrolase; n=2; ...    35   1.6  
UniRef50_UPI000155C628 Cluster: PREDICTED: similar to B-cell sca...    34   2.8  
UniRef50_A6KZM2 Cluster: Glycoside hydrolase family 20; n=2; Bac...    33   4.9  
UniRef50_Q7RCI1 Cluster: Arabidopsis thaliana At3g18860/MCB22_3;...    33   8.6  
UniRef50_A3M0H7 Cluster: Phosphatidylinositol N-acetylglucosamin...    33   8.6  

>UniRef50_A5IMB7 Cluster: Metal dependent phosphohydrolase; n=2;
           Thermotoga|Rep: Metal dependent phosphohydrolase -
           Thermotoga petrophila RKU-1
          Length = 428

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +3

Query: 468 IYTGFVFILCILQKKKLYENSNNWHLIKIAFIQNIFMVQMRNFKRKTFDR---------Y 620
           I  GF+F+   L  + L++N +NW LI + F+ N+F   + N K   F R          
Sbjct: 19  ILVGFLFLF-FLDLENLFQNPHNWSLIILFFLTNLFFDAV-NIKTLEFTRGKVETSAVFI 76

Query: 621 VRIIAELSLNPLRVS 665
           V I     LNPL  S
Sbjct: 77  VNIFTAALLNPLEAS 91


>UniRef50_UPI000155C628 Cluster: PREDICTED: similar to B-cell
           scaffold protein with ankyrin repeats 1; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           B-cell scaffold protein with ankyrin repeats 1 -
           Ornithorhynchus anatinus
          Length = 463

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = -1

Query: 443 CKTLVSTKRISKN---KKCYFIVRILNTSESGMLYVCDV 336
           CK L+ +KR+ +    KKC+F+ +IL+ SES +  +C V
Sbjct: 63  CKLLILSKRLLRRLSPKKCHFLDKILHPSESVVFLLCGV 101


>UniRef50_A6KZM2 Cluster: Glycoside hydrolase family 20; n=2;
           Bacteroides|Rep: Glycoside hydrolase family 20 -
           Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC
           11154)
          Length = 659

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 350 YVCDVGRVFFSLDFQREIIKTLIVHYFNEK*NVCINDCTF 231
           ++ DVGR FF++DF R+ +K L  +  NE   + +ND  F
Sbjct: 156 FMLDVGRKFFTMDFLRQYVKILSFYKLNEF-QIHLNDNGF 194


>UniRef50_Q7RCI1 Cluster: Arabidopsis thaliana At3g18860/MCB22_3;
           n=5; Plasmodium|Rep: Arabidopsis thaliana
           At3g18860/MCB22_3 - Plasmodium yoelii yoelii
          Length = 849

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +3

Query: 339 IAHIQHSTFRCVQNPHNKVTLFVFANTFCTNQSFASLNTI*LHI-YTGFVFILCILQKKK 515
           I +I + T R +   +    +  F+N    +   ++ N I + + +TGFVF +C+ +K K
Sbjct: 250 IKNIHNDTVRDIILFNENKNIITFSNDENIHIYDSNFNLIKICMGHTGFVFYVCVNEKDK 309

Query: 516 LYENSNNWHLIKIAFIQNIFMVQMRNF 596
           L  + ++   IKI  I +I+ + M N+
Sbjct: 310 LMYSCSDDKTIKIWSIDDIYNL-MENY 335


>UniRef50_A3M0H7 Cluster: Phosphatidylinositol
           N-acetylglucosaminyltransferase subunit H; n=2;
           Saccharomycetales|Rep: Phosphatidylinositol
           N-acetylglucosaminyltransferase subunit H - Pichia
           stipitis (Yeast)
          Length = 215

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
 Frame = +3

Query: 450 NTI*LHIYTGF------VFILCILQKKKLYENSNNWHLIKIAF 560
           NTI L I+ GF      +F LCIL K      +NN ++IK+AF
Sbjct: 132 NTIDLVIHEGFHGYGQVIFYLCILTKSSAVGKTNNDNIIKVAF 174


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,199,732
Number of Sequences: 1657284
Number of extensions: 12659447
Number of successful extensions: 26677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26667
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)