Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0274.Seq
(550 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 52 7e-08
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 46 4e-06
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 44 1e-05
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 41 1e-04
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 41 1e-04
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 40 2e-04
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 40 2e-04
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 40 3e-04
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 38 7e-04
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 35 0.007
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 35 0.009
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 34 0.016
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 33 0.037
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 32 0.064
SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces pombe... 30 0.20
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 28 1.0
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 28 1.0
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 27 1.4
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 1.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.2
SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subuni... 26 4.2
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 26 4.2
SPCC1223.12c |meu10||GPI anchored cell surface protein |Schizosa... 25 5.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 5.6
SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr 2|... 25 7.3
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 25 9.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 9.7
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.7
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 51.6 bits (118), Expect = 7e-08
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEA 38
G +QR+ALA +L+ + +IL LDEPTS +DPIT+ I + KG T +V TH M +
Sbjct: 574 GQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAIRAH-RKGKTTLVITHDMSQI 632
Query: 37 EYCDRIGLVYRG 2
+ + ++ +G
Sbjct: 633 NNDELVLVIDKG 644
Score = 33.9 bits (74), Expect = 0.016
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = -1
Query: 208 QRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEAEYC 29
QRLA A +L+ P +L LDE TS +D + L ++ TV++ TH +
Sbjct: 1242 QRLAFARALLRNPRLLILDECTSALD---SKSSLLLEKTIQNLSCTVLIITHQPSLMKLA 1298
Query: 28 DRI 20
DRI
Sbjct: 1299 DRI 1301
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 46.0 bits (104), Expect = 4e-06
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVE-KGVTVMVTTHFMDE 41
G KQRLA++ L+ P+ILF DE TS +D T R +IN +++ T + H +
Sbjct: 583 GEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIKGSHKTSVFIAHRLRT 642
Query: 40 AEYCDRIGLVYRG 2
+ CD I ++ +G
Sbjct: 643 IKDCDIIFVLEKG 655
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 44.0 bits (99), Expect = 1e-05
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEA 38
G KQR+A+A +++ +P I+ LDE TS +D T R+ +N + G T +V H +
Sbjct: 724 GEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRLA-SGRTAIVIAHRLSTI 782
Query: 37 EYCDRIGLVYRG 2
D I + G
Sbjct: 783 TNADLILCISNG 794
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 41.1 bits (92), Expect = 1e-04
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = -1
Query: 271 RGVR-PESIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHIN 95
RG++ + + + T+EL G++ R+ALA L +P ++ LDEPT+ +D WL
Sbjct: 405 RGLQFTDEMIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLD--LEAVAWLEEY 462
Query: 94 SMVE-KGVTVMVTTHFMDEA-EYCDRIGLVY 8
E +G T+++T H D E C I +Y
Sbjct: 463 LTHEMEGHTLLITCHTQDTLNEVCTDIIHLY 493
Score = 30.3 bits (65), Expect = 0.20
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = -1
Query: 229 ELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHF 50
+L G ++R+ A M +P IL LDEPT+ +D T +N+ G V +T F
Sbjct: 712 QLSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNF--DGGVVFITHDF 769
Query: 49 MDEAEYCDRIGLVYRG 2
+ + I +V G
Sbjct: 770 RLIDQVAEEIWIVQNG 785
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 40.7 bits (91), Expect = 1e-04
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = -1
Query: 256 ESIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVD 131
+ + SHAT G++ RL+LA +L +PD+L LDEP++ +D
Sbjct: 345 QEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD 386
Score = 33.9 bits (74), Expect = 0.016
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVD 131
G K R+A AC + P IL LDEPT+ +D
Sbjct: 640 GQKSRVAFACLGLQNPHILILDEPTNHLD 668
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTH 53
G+K +LAL ++ PDIL LDEPT+ +D + WL + +K V+ ++ +H
Sbjct: 552 GWKMKLALTRAMFKNPDILLLDEPTNHLDVV--NVAWLENFLVNQKDVSSIIVSH 604
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 268 GVRPESIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVD 131
G+ E ++ L G K +L LA P ++ LDEPT+ +D
Sbjct: 890 GLDAELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLD 935
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTH 53
G+K +L LA +++ + DIL LDEPT+ +D WL +K +T ++ +H
Sbjct: 566 GWKMKLELARAMLQKADILLLDEPTNHLD--VANIAWLEAYLTSQKNITCLIVSH 618
Score = 30.3 bits (65), Expect = 0.20
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 259 PESIASHAT-DELPLGFKQRLALACSLMHEPDILFLDEPTSGVD 131
P IA ++ L G K ++ +A L + P +L LDEPT+ +D
Sbjct: 899 PGDIADYSPISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 39.5 bits (88), Expect = 3e-04
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = -1
Query: 277 HERGVRPESIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHI 98
H G E +A T ++ G++ R+AL+ +L +P +L LDEPT+ +D WL
Sbjct: 205 HGLGFTQEMMAK-PTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLD--LEAVVWLE- 260
Query: 97 NSMVEKGVTVMVTTHFMD 44
N + + ++VT+H D
Sbjct: 261 NYLAKYDKILVVTSHSQD 278
Score = 32.3 bits (70), Expect = 0.048
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 241 HATDELPL---GFKQRLALACSLMHEPDILFLDEPTSGVD 131
H T E+ G K R+ A + +P IL LDEPT+ +D
Sbjct: 505 HQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLD 544
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 38.3 bits (85), Expect = 7e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEA 38
G KQR+A+A +L+ P IL LDE TS +D + + +N+ +G T + H +
Sbjct: 1262 GQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALNA-ASQGRTTVAIAHRLSSI 1320
Query: 37 EYCDRI 20
+ D I
Sbjct: 1321 QDADCI 1326
Score = 35.5 bits (78), Expect = 0.005
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEA 38
G KQR+A+A +++ +P IL LDE TS +D + +++ + T +V H +
Sbjct: 571 GQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALDN-ASRSRTTIVIAHRLSTI 629
Query: 37 EYCDRIGLVYRG 2
D I +V G
Sbjct: 630 RNADNIVVVNAG 641
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 35.1 bits (77), Expect = 0.007
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 ELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMV-EKGVTVMVTTH 53
+L G KQR+A+A +L+ P L LDE TS +D I S++ + +T + H
Sbjct: 619 QLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAH 678
Query: 52 FMDEAEYCDRIGLVYRG 2
+ D+I +V G
Sbjct: 679 KLATIRRADQIIVVGDG 695
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 34.7 bits (76), Expect = 0.009
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 208 QRLALAC-SLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEAEY 32
QR L C +++ +P ++ LDEP GVD ++N + +++ +H+ DE
Sbjct: 411 QRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIISHYEDELPA 470
Query: 31 C 29
C
Sbjct: 471 C 471
Score = 31.9 bits (69), Expect = 0.064
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITR 119
G +R LA L+ P +L LDEP +G+D +R
Sbjct: 152 GQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSR 184
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 33.9 bits (74), Expect = 0.016
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 211 KQRLALACSLMHEPDIL-FLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEA- 38
++R + L +P +L FLDEPTSG+D + + + + G ++ T H
Sbjct: 1028 RKRATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADAGQAILCTIHQPSAVL 1087
Query: 37 -EYCDRIGLVYRG 2
+ DR+ L+ +G
Sbjct: 1088 FDQFDRLLLLQKG 1100
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 32.7 bits (71), Expect = 0.037
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLH-INSMVEKGVTVMVTTH---- 53
G KQR+ALA ++ I+ +D+ S +D T + H S + + TV++ TH
Sbjct: 743 GQKQRIALARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTHNVHL 802
Query: 52 FMDEAEY 32
FMD A +
Sbjct: 803 FMDSAAF 809
Score = 30.3 bits (65), Expect = 0.20
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = -1
Query: 313 LTRSGAERKNLPHERGVRPESIA--SHATDE---LPLGFKQRLALACSLMHEPDILFLDE 149
L SGA + H +P I +H E G KQ LALA +++ I+ LDE
Sbjct: 1322 LKTSGASSMIMAHTDDQKPIHITLDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDE 1381
Query: 148 PTSGVD 131
T+ VD
Sbjct: 1382 CTASVD 1387
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 31.9 bits (69), Expect = 0.064
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -1
Query: 217 GFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTH 53
G +Q LALA +L+ + I+ LDE T+ VD T R + + K TV+ H
Sbjct: 1328 GQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLRAAF-KHATVLCIAH 1381
>SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 30.3 bits (65), Expect = 0.20
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 254 FRPNASLMREIFSFCARPRKPYTPEKKRKFCSTVSYRRAKIFAPYSRDAGALYRNSLSDP 433
FR + S + + F + ++R+F VS A+ PY ++ + +R SLS P
Sbjct: 35 FRTSVSNIPQEKKFVPSHLSHFGSSQQRRFAPEVSSPLAE---PY--ESSSSFRLSLSSP 89
Query: 434 SPAPAPGPEVGTSKPHI 484
+ GP GT KP +
Sbjct: 90 PSSKFGGPSFGTPKPFL 106
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +3
Query: 183 SEQASASRCLKPNGSSSVAWEAILSGRTPRSCGRFFRSAPDRVSHTHQRKSVNSVRPSVT 362
++ S S NG+ V+ S + R+C + D ++ HQR+ + PS T
Sbjct: 286 NDNVSVSVKALENGNEEVSNNHARSPHSSRACNTIPSNKNDGLNDDHQRQDSSVAEPSPT 345
Query: 363 VERKFLRHIAEMLAR 407
+R L + L R
Sbjct: 346 SKRLRLTRLPLPLLR 360
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 226 LPLGFKQRLALACSLMHEP-DILFLDEPTSGVDPITRREFWLHINSMVEKGVTVM 65
L L K+ L++A L P IL LDEP +G+D + + + G++++
Sbjct: 899 LSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARSGLSIL 953
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 27.5 bits (58), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 392 RDAGALYRNSLSDPSPAPAPGPEVGTSKPHI 484
+ A A S +PAPAP PE SKP I
Sbjct: 283 KKAWASVAKSKKKVTPAPAPAPESEPSKPSI 313
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 265 VRPESIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITR 119
V P I S D +PLGF+ + AL C + F D + + P+ R
Sbjct: 969 VLPVIIRSFERDTIPLGFR-KSALKCIAQLFQSVNFSDHASRIIHPLVR 1016
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 3.2
Identities = 27/95 (28%), Positives = 41/95 (43%)
Frame = +3
Query: 36 SASSIKWVVTITVTPFSTMLLMCSQNSRRVMGSTPEVGSSRNRMSGSCISEQASASRCLK 215
S SS T + + S+ ++ S +S S+P SS S S S S S +
Sbjct: 253 SLSSSSSSSTASSSSSSSSIISSSSSS----SSSPTSTSSTISSSSSSSSSPTSTSSTIS 308
Query: 216 PNGSSSVAWEAILSGRTPRSCGRFFRSAPDRVSHT 320
+ SSS ++ + LS + S F S+P S T
Sbjct: 309 SSSSSSSSFSSTLSS-SSMSSSSSFSSSPTSSSST 342
Score = 24.6 bits (51), Expect = 9.7
Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 8/120 (6%)
Frame = +3
Query: 27 SQYSASSIKWVVTITVTPFSTMLLMCSQNSRRVMGSTPEVGSSRNRMSG--------SCI 182
SQ S SS + P ST S +S S+P SS S S
Sbjct: 185 SQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTS 244
Query: 183 SEQASASRCLKPNGSSSVAWEAILSGRTPRSCGRFFRSAPDRVSHTHQRKSVNSVRPSVT 362
S +S S L + SSS A + S + S S+P S T S +S P+ T
Sbjct: 245 SSSSSTSSSLSSSSSSSTA-SSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTST 303
>SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subunit
Cwg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = -1
Query: 325 WCVWLTRSGAERKNLPHERGVRPESIASHATDELPLGFKQRLALACSLMHEPDILFLDEP 146
W W+ ++ +++ +G++ ++ T P+ F+Q LA ++ +LFL +
Sbjct: 58 WIEWIYKNYVTKES----KGIKYSGFQAYRTGIQPISFEQEPQLAGTVFSICCLLFLGDN 113
Query: 145 TSGVD 131
S +D
Sbjct: 114 LSRID 118
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 25.8 bits (54), Expect = 4.2
Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Frame = +2
Query: 260 PNASLMREIFSFCARPRKPYTPEKKRKFCSTVSYRRAKIFAPYSRDAGALYRNSLSDPSP 439
P+AS + +P Y P R ST SYRR +I S A +S P
Sbjct: 431 PHASASKLAAKPSVKPAGAYRPPGARGQNSTFSYRREEIDVMSSGSANKHVNSSRQRVVP 490
Query: 440 APAP---GPEVGTSKPHIILKVVDLPRRLAQENQK 535
P G + K +K V P + +K
Sbjct: 491 GATPVIDGNKKNNKKTKPAVKQVAQPTAEVSDEKK 525
>SPCC1223.12c |meu10||GPI anchored cell surface protein
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 416
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 225 SSSVAWEAILSGRTPRSCG 281
+S AW +++G TP CG
Sbjct: 11 TSFTAWSVVIAGATPAVCG 29
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -1
Query: 295 ERKNLPHERGVRPESIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRR 116
+RKNL + E + + D LGF + L+ + + +L L+ VDP
Sbjct: 1061 QRKNLYTLSSILSEIFSIESCDSKQLGFFRPLSEFIEVSKQDTMLMLERLVDVVDPEVYF 1120
Query: 115 EF 110
EF
Sbjct: 1121 EF 1122
>SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +2
Query: 134 NAGSRFVEKQ--NVRFMHQRTGQRQPL 208
+ G F+E++ NV + +GQRQPL
Sbjct: 129 DVGQHFIEEEERNVSLSNNSSGQRQPL 155
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 314 PYTPEKKRKFCSTVSYRRAKIFAPYSRDAGALYRNSLSDPS-PAPAPGPEVGTS 472
PY+P + +++ R IF P S+ L S P+ P E G S
Sbjct: 392 PYSPNSNHEEINSIPLRNKNIFVPPSQGHSPLLEKIKKQGSLPSTTPVNEGGIS 445
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 24.6 bits (51), Expect = 9.7
Identities = 28/104 (26%), Positives = 42/104 (40%)
Frame = +3
Query: 33 YSASSIKWVVTITVTPFSTMLLMCSQNSRRVMGSTPEVGSSRNRMSGSCISEQASASRCL 212
YS++S + T TP S+ S +S STP S + +S S S +S+S
Sbjct: 134 YSSTSASSTSSSTATPSSSSTTSSSSSS---SSSTPISSSITSSISSSASSSVSSSS--A 188
Query: 213 KPNGSSSVAWEAILSGRTPRSCGRFFRSAPDRVSHTHQRKSVNS 344
+GS S A +S + + F S S S +S
Sbjct: 189 SSSGSISSADAKTVSASSNSTISGFSTSTTSASSSAAGNSSSSS 232
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 205 RLALACSLMHEPDILFLDEPTSGVD 131
RLALA L IL LDEPT+ +D
Sbjct: 1195 RLALAECLGVNCGILALDEPTTNLD 1219
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 24.6 bits (51), Expect = 9.7
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 132 STPEVGSSRNRMSGSCISEQASASRCLKPNGSSSVAWEAILSGRTPRSCGRFF-RSAPDR 308
S+ SS + + S S +SA+ + SSS + + S ++ S + RS+
Sbjct: 117 SSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRT 176
Query: 309 VSHTHQRKSVNSVRPSV 359
SH +S RP+V
Sbjct: 177 TSHRTTSHKSSSYRPTV 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,510,136
Number of Sequences: 5004
Number of extensions: 54959
Number of successful extensions: 221
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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