Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0273X.Seq
         (526 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023D743 Cluster: hypothetical protein FG05749.1; ...    33   3.0  
UniRef50_A2ECP0 Cluster: Putative uncharacterized protein; n=1; ...    32   7.0  
UniRef50_Q7SEP4 Cluster: Putative uncharacterized protein NCU032...    32   7.0  
UniRef50_UPI0000D8E026 Cluster: UPI0000D8E026 related cluster; n...    32   9.3  
UniRef50_Q4DT74 Cluster: Tubulin-tyrosine ligase-like protein, p...    32   9.3  
UniRef50_Q1RPZ6 Cluster: Zinc finger protein; n=2; Ciona intesti...    32   9.3  
UniRef50_Q16SB7 Cluster: Zinc finger protein, putative; n=1; Aed...    32   9.3  
UniRef50_A1D8H4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_UPI000023D743 Cluster: hypothetical protein FG05749.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05749.1 - Gibberella zeae PH-1
          Length = 363

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 365 LCSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAQSVDRLRYMRE 222
           +C   PS   +  Q  +L++ SW  T PPH   L P  S    R+ +E
Sbjct: 218 ICPGTPSFY-LDNQPAYLTMSSWGHTVPPHNQDLTPHMSTPEFRFYKE 264


>UniRef50_A2ECP0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 321

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 39  LLAIVHNSRALVAEVVDVLKLGKEIGEE 122
           +LA +HN+   V + +D LK GK+IG E
Sbjct: 272 ILATIHNNAGNVTKAIDSLKKGKDIGSE 299


>UniRef50_Q7SEP4 Cluster: Putative uncharacterized protein NCU03298.1;
            n=1; Neurospora crassa|Rep: Putative uncharacterized
            protein NCU03298.1 - Neurospora crassa
          Length = 1181

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 434  NNVFAPIPLEGRRTLSSVCPLPPLCSEGP 348
            +N  AP+P+E   TLS   PL P CS  P
Sbjct: 1024 SNTSAPVPIEDMMTLSKWKPLQPECSPNP 1052


>UniRef50_UPI0000D8E026 Cluster: UPI0000D8E026 related cluster; n=3;
           Danio rerio|Rep: UPI0000D8E026 UniRef100 entry - Danio
           rerio
          Length = 551

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
 Frame = -1

Query: 463 RKRHTIEQ---SLTTCSLQFRLKADVHSHLSVHCRHFVQKDRHVVQFQLKTGSSPSVLGQ 293
           ++RH ++    S + C+LQFR  +    H+  H  H      +V     KT +  + L  
Sbjct: 387 QRRHRLKSRGFSCSQCNLQFRFFSSFKEHMIAHAGH----SPYVCTLCPKTFTEEASL-- 440

Query: 292 EQGHRTGLLYSQLNLSIDCDICESCASINLSRLL 191
              H    +   L  S+ CD+C    S NLS L+
Sbjct: 441 ---HAHQCVSHNLRTSLKCDVCSKTFS-NLSNLI 470


>UniRef50_Q4DT74 Cluster: Tubulin-tyrosine ligase-like protein,
           putative; n=2; Trypanosoma cruzi|Rep: Tubulin-tyrosine
           ligase-like protein, putative - Trypanosoma cruzi
          Length = 631

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -2

Query: 381 LSTAATLFRRTVMSCSFNSKRVPLPPFLARNKATAPAFSIPSSIC--RSIAIYARV 220
           L TA  LF  T  SC + + R+PL     +   T   FS+PS++   RS+ +Y  V
Sbjct: 70  LGTALPLFCITSSSCEYYALRLPLLKAGFKRLPTGTNFSLPSNVLWGRSMPLYPAV 125


>UniRef50_Q1RPZ6 Cluster: Zinc finger protein; n=2; Ciona
           intestinalis|Rep: Zinc finger protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 831

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 475 AHPARKRHTIEQSLTTCSLQFRLKADVHSHLSVH 374
           AH AR       + T C++ F+ K+D+H H+  H
Sbjct: 597 AHEARHSGLKHHACTVCAMSFQYKSDLHRHMLKH 630


>UniRef50_Q16SB7 Cluster: Zinc finger protein, putative; n=1; Aedes
           aegypti|Rep: Zinc finger protein, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 524

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = -1

Query: 439 SLTTCSLQFRLKADVHSHLSVHCRHFVQKDRHVVQFQLKTGSSPSVLGQEQGHRTGLLYS 260
           S T CS  FR K+++ SHL +H     +  +HV +   K  S  S L     H   LL+S
Sbjct: 377 SCTHCSKTFRSKSNLLSHLKLH-SEIPEHTKHVCKLCNKGFSRKSYL----KHHNSLLHS 431

Query: 259 QLNLSIDCDIC 227
           +     +C  C
Sbjct: 432 E-ETPFECTFC 441


>UniRef50_A1D8H4 Cluster: Putative uncharacterized protein; n=1;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 321

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 353 GPSCRAVSTQNG--FLSLRSWPGTRPPHRPSLFPAQSVD 243
           GP CRAV  Q+    +  + WPG RP       P+Q+VD
Sbjct: 137 GPPCRAVIAQDRRQLVGPQPWPGARPVPAHRARPSQTVD 175


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,165,552
Number of Sequences: 1657284
Number of extensions: 10526167
Number of successful extensions: 34279
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34264
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)