Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0273X.Seq
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 526 SLWGGTCARVCAPARQVAHPARKRHTIEQ 440
           SL+     +VC   +++ H  RKR  +E+
Sbjct: 219 SLYQNATRKVCGVWKRIPHDYRKRFRMEK 247


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 364 FVQKDRHVVQFQLKT 320
           FV  + HV QF LKT
Sbjct: 172 FVNVNAHVAQFTLKT 186


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 386 SVCPLPPLCSEGPSCRAVSTQNG 318
           ++C  PP   E  SC AV   +G
Sbjct: 8   AICDNPPCDDEVESCIAVGVGSG 30


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 364 FVQKDRHVVQFQLKT 320
           F+  + HV QF LKT
Sbjct: 172 FINVNAHVAQFTLKT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,979
Number of Sequences: 336
Number of extensions: 2427
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)