Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0273X.Seq
         (526 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.29 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   0.51 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.7  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   6.3  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   8.3  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 350 PSCRAVSTQNGFLSLR--SWPGTRPPHRPSLFP 258
           PSCR+   +    S R  SWP +RP  +P   P
Sbjct: 269 PSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLP 301


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -1

Query: 436  LTTCSLQFRLKADVHSHLSVHCRHFVQKDRHVVQFQLKTGSSPSV 302
            L TC+ Q +       ++ VHCR        + + Q++ G +P +
Sbjct: 1986 LPTCASQCKATEKAPKYVDVHCRDATDSVAQLYKQQIRKGVNPDM 2030


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 20/78 (25%), Positives = 29/78 (37%)
 Frame = -1

Query: 370 RHFVQKDRHVVQFQLKTGSSPSVLGQEQGHRTGLLYSQLNLSIDCDICESCASINLSRLL 191
           +H +Q+ +   Q Q             Q H  G  +     S+     ESC +  LSR L
Sbjct: 635 QHLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTHHGP---SLMSSARESCGASALSRKL 691

Query: 190 IRGSSTPSDTFSVFPTTF 137
           +  S+ P    S  P  F
Sbjct: 692 LTESAPPIAPMSPRPNRF 709


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 389 SSVCPLPPLCSEGPSCRAVSTQ-NGFLS 309
           S +  +PPL ++GPS     TQ  GF S
Sbjct: 309 SGITGVPPLPADGPSNPGPQTQTEGFYS 336


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 349 GPSEQSGGSGQTDESVRRPSSGIGANTLLG 438
           G SEQ G  G+   SV   SSG    TL G
Sbjct: 5   GGSEQLGPDGRRRSSVYTTSSGETGITLPG 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,959
Number of Sequences: 2352
Number of extensions: 11322
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)