Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0273X.Seq
(526 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106677-1|AAD05225.1| 693|Drosophila melanogaster dissatisfact... 29 2.9
AE014134-989|AAF52303.1| 691|Drosophila melanogaster CG9019-PA ... 29 2.9
AY846306-1|AAW30393.1| 326|Drosophila melanogaster chromator pr... 28 6.7
AY069818-1|AAL39963.1| 926|Drosophila melanogaster SD06626p pro... 28 6.7
AE014296-3738|AAN12209.2| 926|Drosophila melanogaster CG10712-P... 28 6.7
AE014296-3737|AAF51877.2| 926|Drosophila melanogaster CG10712-P... 28 6.7
AE014296-3736|AAF51878.2| 926|Drosophila melanogaster CG10712-P... 28 6.7
X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protei... 28 8.9
M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein. 28 8.9
BT030241-1|ABN49380.1| 74|Drosophila melanogaster IP18279p pro... 28 8.9
AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p pro... 28 8.9
AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA... 28 8.9
AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA ... 28 8.9
>AF106677-1|AAD05225.1| 693|Drosophila melanogaster dissatisfaction
protein.
Length = 693
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Frame = -3
Query: 404 GRRTLSSVCPLPPLCSEGPSCRAVSTQNGFLSLRSWPGT-------RPPHRPSLFPAQSV 246
G T ++ P PP G +C S+ +GFL L P + H LFP Q +
Sbjct: 430 GSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSPDKCQELIQYQVQHNTLLFPQQLL 489
Query: 245 DRLRYMRELCQ 213
D E+ Q
Sbjct: 490 DSRLLSWEMLQ 500
>AE014134-989|AAF52303.1| 691|Drosophila melanogaster CG9019-PA
protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Frame = -3
Query: 404 GRRTLSSVCPLPPLCSEGPSCRAVSTQNGFLSLRSWPGT-------RPPHRPSLFPAQSV 246
G T ++ P PP G +C S+ +GFL L P + H LFP Q +
Sbjct: 428 GSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSPDKCQELIQYQVQHNTLLFPQQLL 487
Query: 245 DRLRYMRELCQ 213
D E+ Q
Sbjct: 488 DSRLLSWEMLQ 498
>AY846306-1|AAW30393.1| 326|Drosophila melanogaster chromator
protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 484 RQVAHPARKRHTIEQSLTTCSLQFRLKADVHSHLSVHC 371
+Q A PAR+R + ++ LQ L+ ++H H + C
Sbjct: 67 QQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQAQLC 104
>AY069818-1|AAL39963.1| 926|Drosophila melanogaster SD06626p
protein.
Length = 926
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 484 RQVAHPARKRHTIEQSLTTCSLQFRLKADVHSHLSVHC 371
+Q A PAR+R + ++ LQ L+ ++H H + C
Sbjct: 667 QQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQAQLC 704
>AE014296-3738|AAN12209.2| 926|Drosophila melanogaster CG10712-PC,
isoform C protein.
Length = 926
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 484 RQVAHPARKRHTIEQSLTTCSLQFRLKADVHSHLSVHC 371
+Q A PAR+R + ++ LQ L+ ++H H + C
Sbjct: 667 QQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQAQLC 704
>AE014296-3737|AAF51877.2| 926|Drosophila melanogaster CG10712-PB,
isoform B protein.
Length = 926
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 484 RQVAHPARKRHTIEQSLTTCSLQFRLKADVHSHLSVHC 371
+Q A PAR+R + ++ LQ L+ ++H H + C
Sbjct: 667 QQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQAQLC 704
>AE014296-3736|AAF51878.2| 926|Drosophila melanogaster CG10712-PA,
isoform A protein.
Length = 926
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 484 RQVAHPARKRHTIEQSLTTCSLQFRLKADVHSHLSVHC 371
+Q A PAR+R + ++ LQ L+ ++H H + C
Sbjct: 667 QQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQAQLC 704
>X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protein
protein.
Length = 1299
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 390 LICLSTAATLFRRTVMSCSFNSKRVPLPPFLARNKATAPAFSIPSSICRS 241
L+C STAA L ++ FN+ + PFLA F + ++ S
Sbjct: 467 LMCFSTAAGLGLSALLGIVFNAASTQVVPFLALGLGVDHIFMLTAAYAES 516
>M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.
Length = 1286
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 390 LICLSTAATLFRRTVMSCSFNSKRVPLPPFLARNKATAPAFSIPSSICRS 241
L+C STAA L ++ FN+ + PFLA F + ++ S
Sbjct: 467 LMCFSTAAGLGLSALLGIVFNAASTQVVPFLALGLGVDHIFMLTAAYAES 516
>BT030241-1|ABN49380.1| 74|Drosophila melanogaster IP18279p
protein.
Length = 74
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = -2
Query: 351 TVMSCSFN-SKRVPLP---PFLARNKATAPAFSIPSSI 250
T+M C F SK V LP P A+ ++T P F I S+
Sbjct: 14 TIMGCCFGKSKSVDLPAVPPAPAKQRSTLPEFPISGSV 51
>AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p
protein.
Length = 1150
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 128 RIMERCR-KDAKRIGGRRTPPNQKT*KINTGTTLAYIAIDRQIELGIEKAGAVALFLAKN 304
R+++R R +D R+G R+PP+ T TT I I + I +K+ + L
Sbjct: 187 RVVQRDRERDHHRLGSSRSPPSSST------TTTTKIRIHQDIVGKRQKSPGLGSGL--- 237
Query: 305 GGRGTRFELKLHDMTVLLNKVAAVDRQMRVYVGLQAELERTR 430
GG + ++H + K+ R L+ E ER R
Sbjct: 238 GGGSSSSSSRMHHQLMSREKIIIQTRARGRTPSLERERERER 279
>AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA
protein.
Length = 1150
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 128 RIMERCR-KDAKRIGGRRTPPNQKT*KINTGTTLAYIAIDRQIELGIEKAGAVALFLAKN 304
R+++R R +D R+G R+PP+ T TT I I + I +K+ + L
Sbjct: 187 RVVQRDRERDHHRLGSSRSPPSSST------TTTTKIRIHQDIVGKRQKSPGLGSGL--- 237
Query: 305 GGRGTRFELKLHDMTVLLNKVAAVDRQMRVYVGLQAELERTR 430
GG + ++H + K+ R L+ E ER R
Sbjct: 238 GGGSSSSSSRMHHQLMSREKIIIQTRARGRTPSLERERERER 279
>AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA
protein.
Length = 1286
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 390 LICLSTAATLFRRTVMSCSFNSKRVPLPPFLARNKATAPAFSIPSSICRS 241
L+C STAA L ++ FN+ + PFLA F + ++ S
Sbjct: 467 LMCFSTAAGLGLSALLGIVFNAASTQVVPFLALGLGVDHIFMLTAAYAES 516
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,234,715
Number of Sequences: 53049
Number of extensions: 518796
Number of successful extensions: 1552
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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