Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0272.Seq
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9DVT5 Cluster: PxORF98 peptide; n=1; Plutella xylostel...    37   0.41 
UniRef50_A1HG51 Cluster: Putative uncharacterized protein; n=2; ...    35   1.3  
UniRef50_UPI00015A451D Cluster: UPI00015A451D related cluster; n...    35   1.7  
UniRef50_Q05934 Cluster: Vacuolar import and degradation protein...    35   1.7  
UniRef50_A7TJM5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q5A7H2 Cluster: Putative uncharacterized protein ERD1; ...    28   4.4  
UniRef50_A0D345 Cluster: Chromosome undetermined scaffold_36, wh...    33   5.1  
UniRef50_Q8A8H3 Cluster: Outer membrane protein, OmpA family; n=...    33   6.7  
UniRef50_A7FXM5 Cluster: ComEC/Rec2 family protein; n=4; Clostri...    32   8.9  
UniRef50_Q2H8B1 Cluster: Putative uncharacterized protein; n=2; ...    32   8.9  

>UniRef50_Q9DVT5 Cluster: PxORF98 peptide; n=1; Plutella xylostella
           granulovirus|Rep: PxORF98 peptide - Plutella xylostella
           granulovirus
          Length = 281

 Score = 36.7 bits (81), Expect = 0.41
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 523 PVCVACDGISVGLVSAPNLYLCICVRACL-CARRPHLPMHTLYIF 392
           P C+ C   ++  V+ P  + C+CV  CL C   P   +HT  +F
Sbjct: 222 PQCLKCRCATISTVALPCFHFCLCVDCCLACVECPACHVHTTGVF 266


>UniRef50_A1HG51 Cluster: Putative uncharacterized protein; n=2;
           Ralstonia pickettii|Rep: Putative uncharacterized
           protein - Ralstonia pickettii 12J
          Length = 85

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 287 TRSELARRRLGLATCGHRIHIFLGFSNDFFSHVLYKYI*CMHRKVR 424
           TR E    RL  A CG RIH F  FS     H    Y+ C+  ++R
Sbjct: 32  TRLEFWESRLAFAFCGKRIHSFFPFSKQVSFHGHALYVHCLEFQMR 77


>UniRef50_UPI00015A451D Cluster: UPI00015A451D related cluster; n=1;
           Danio rerio|Rep: UPI00015A451D UniRef100 entry - Danio
           rerio
          Length = 1281

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = -3

Query: 556 KFNCSGTKGRRPVCVACDGISVGLVSAPNLYLCICVRACLCARRP 422
           +++ S +    PVCV    +S+ L+   ++YLC+CV  C+C++ P
Sbjct: 484 EWSVSSSSSSSPVCVV--SLSL-LIMTLSVYLCVCVCVCVCSQLP 525


>UniRef50_Q05934 Cluster: Vacuolar import and degradation protein
           22; n=2; Saccharomyces cerevisiae|Rep: Vacuolar import
           and degradation protein 22 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 901

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 48  IFSMSFVKFYNRMNQTW*DNNRADLLSISIELSFYQQ*KYNNILLSHLHKYN 203
           +F M  + F++  +  W  NN   +LSI     F+ Q K   +++ +LH+YN
Sbjct: 274 LFEMQKINFFSLSHSVW--NNTISILSIQYYDDFHSQVKTLPLIIQNLHEYN 323


>UniRef50_A7TJM5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 671

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 33  NEETFIFSMSFVKFYNRMNQTW*DNNRADLLSISIELSFYQQ*KYNN 173
           NE   +  ++F+KF+N +N+ W DN     +   I+  F ++  YN+
Sbjct: 607 NESALLLMLNFIKFFNAVNEQW-DNKLLIEVQEKIDAKFNEKRNYND 652


>UniRef50_Q5A7H2 Cluster: Putative uncharacterized protein ERD1;
           n=3; Saccharomycetales|Rep: Putative uncharacterized
           protein ERD1 - Candida albicans (Yeast)
          Length = 467

 Score = 27.9 bits (59), Expect(2) = 4.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 324 LLADTEYTFFWDFPMIFFLTYFINIYSVCIGR 419
           L  ++ Y+F WD  M + L  F  ++SV  G+
Sbjct: 311 LAVNSTYSFIWDIKMDWHLELFDGLFSVISGK 342



 Score = 24.2 bits (50), Expect(2) = 4.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 180 LSHLHKYNYNAVSINLIYSF 239
           L+HL+ + Y A+++N  YSF
Sbjct: 300 LNHLNNWLYFALAVNSTYSF 319


>UniRef50_A0D345 Cluster: Chromosome undetermined scaffold_36, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_36,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 148

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 114 LCYYLTTFDSFCYKILQ 64
           LC+ LT+F SFCYKILQ
Sbjct: 7   LCFILTSFYSFCYKILQ 23


>UniRef50_Q8A8H3 Cluster: Outer membrane protein, OmpA family; n=7;
           Bacteria|Rep: Outer membrane protein, OmpA family -
           Bacteroides thetaiotaomicron
          Length = 266

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -1

Query: 198 ICVNDLIKYYYISIVGKNLILSKWKVNPLCYYLTTFDSFC 79
           +CV +L+KYY+I++  K+ I++K K   L   +T   S C
Sbjct: 9   LCVVNLLKYYFINLFKKHCIMNKMKWMVLFMSITMIFSGC 48


>UniRef50_A7FXM5 Cluster: ComEC/Rec2 family protein; n=4;
           Clostridium botulinum|Rep: ComEC/Rec2 family protein -
           Clostridium botulinum (strain ATCC 19397 / Type A)
          Length = 595

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -1

Query: 192 VNDLIKYYYISIVGKNLILSKWKVNPLCYYLTTFDSFCYKILQKTY 55
           +N +I  + I I G   +LS   + P C Y+  F+  C+ I+  +Y
Sbjct: 375 INKIIYIFLIMIEGAQYLLSN--ITPDCIYIREFEGICFVIIYMSY 418


>UniRef50_Q2H8B1 Cluster: Putative uncharacterized protein; n=2;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 419

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 272 YINECTRSELARRRLGLATCGHRIHIFLGF 361
           ++  CTR    R+ +G A C   IH+FL F
Sbjct: 327 FVERCTRDAKLRKHIGRAPCQPDIHLFLAF 356


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,093,170
Number of Sequences: 1657284
Number of extensions: 10290513
Number of successful extensions: 26892
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26614
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)