Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0272.Seq
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029967-1|ABM92841.1|  178|Drosophila melanogaster IP17896p pro...    29   4.8  
AY069806-1|AAL39951.1| 1157|Drosophila melanogaster SD04681p pro...    29   6.3  
AE014297-1051|AAF54460.1|  265|Drosophila melanogaster CG8534-PA...    29   6.3  
AE014296-3555|AAN12171.1| 1157|Drosophila melanogaster CG7597-PB...    29   6.3  
AE014296-3554|AAF51738.1| 1157|Drosophila melanogaster CG7597-PA...    29   6.3  
BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    28   8.4  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    28   8.4  

>BT029967-1|ABM92841.1|  178|Drosophila melanogaster IP17896p
           protein.
          Length = 178

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +3

Query: 351 FWDFPMIFFLTYFINIYSVCIGRCGRRAQRHARTHIHKYKLGADTSPTLIPSHATHT 521
           FW    I F  +FI  + VCI    RR Q+ AR     Y +    +P ++ S ATHT
Sbjct: 18  FWVGLSIAFAIFFITSFVVCI----RRRQKAARN--VGYTISEGVAPVVVTS-ATHT 67


>AY069806-1|AAL39951.1| 1157|Drosophila melanogaster SD04681p
           protein.
          Length = 1157

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 423 GRRAQRHARTHIHKYKLGADTSPTLIPSHATHTGR 527
           G  A RH  +H HKY  G   S T  PSH T T +
Sbjct: 428 GSNAFRHGGSHKHKY--GTTVSST--PSHTTRTSK 458


>AE014297-1051|AAF54460.1|  265|Drosophila melanogaster CG8534-PA
           protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = -1

Query: 174 YYYISIVGKNLILSKWK----VNPLCYYLTTFDSFCYKILQ 64
           YYY+S V K++  S+WK    +  L  ++    +F Y ++Q
Sbjct: 179 YYYLSSVSKDVQTSRWKKYITIVQLVQFILVLANFSYTLMQ 219


>AE014296-3555|AAN12171.1| 1157|Drosophila melanogaster CG7597-PB,
           isoform B protein.
          Length = 1157

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 423 GRRAQRHARTHIHKYKLGADTSPTLIPSHATHTGR 527
           G  A RH  +H HKY  G   S T  PSH T T +
Sbjct: 428 GSNAFRHGGSHKHKY--GTTVSST--PSHTTRTSK 458


>AE014296-3554|AAF51738.1| 1157|Drosophila melanogaster CG7597-PA,
           isoform A protein.
          Length = 1157

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 423 GRRAQRHARTHIHKYKLGADTSPTLIPSHATHTGR 527
           G  A RH  +H HKY  G   S T  PSH T T +
Sbjct: 428 GSNAFRHGGSHKHKY--GTTVSST--PSHTTRTSK 458


>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p
           protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 353 LGFSNDFFSHVLYKYI*CMHRKVRAPRTEAR 445
           +GFS DF +H+ Y Y   M  K R+P+   R
Sbjct: 768 IGFSVDFTAHICYTY---MSSKKRSPKARVR 795


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
           protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 353 LGFSNDFFSHVLYKYI*CMHRKVRAPRTEAR 445
           +GFS DF +H+ Y Y   M  K R+P+   R
Sbjct: 768 IGFSVDFTAHICYTY---MSSKKRSPKARVR 795


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,426,642
Number of Sequences: 53049
Number of extensions: 470754
Number of successful extensions: 1083
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)