Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0270.Seq
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 588 KNRMVYNIFLAVLVVSSPVGELDQ*IVLHLK 496
           K++ +  +  ++L +S PV  +DQ   LH+K
Sbjct: 240 KSKEISKLPKSMLAISDPVFIVDQVAALHIK 270


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 588 KNRMVYNIFLAVLVVSSPVGELDQ*IVLHLK 496
           K++ +  +  ++L +S PV  +DQ   LH+K
Sbjct: 240 KSKEISKLPKSMLAISDPVFIVDQVAALHIK 270


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 335 HAHLQ*VIQLTSACDLHNNI 276
           + H + V+ L  +CDLH+ +
Sbjct: 203 YKHAELVMPLCKSCDLHHRL 222


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 565 DIIYHSIFTYNFII*ILVLFLEESYR 642
           DI  +S F Y F+I +++  ++  YR
Sbjct: 133 DIEIYSQFLYGFMIYLILDTIKSKYR 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,555
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)