Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0262.Seq
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 183 1e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 181 5e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 6e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 6e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 6e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 8e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 8e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 162 2e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 154 5e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 152 2e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 102 2e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 2e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 2e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 1e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 5e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 1e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.10
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.72
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 0.95
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 31 0.95
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 1.3
At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 30 1.7
At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 30 1.7
At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 30 1.7
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.7
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 2.2
At3g28790.1 68416.m03593 expressed protein 29 2.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.2
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.2
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 29 2.2
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 29 3.8
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.8
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.8
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 5.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 5.1
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 28 5.1
At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD, chlor... 28 5.1
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 5.1
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 28 5.1
At4g11050.1 68417.m01796 endo-1,4-beta-glucanase, putative / cel... 28 6.7
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 28 6.7
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 27 8.9
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 27 8.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.9
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 27 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVL 142
Score = 106 bits (254), Expect = 2e-23
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 193
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVL 142
Score = 104 bits (249), Expect = 6e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 193
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVL 142
Score = 104 bits (249), Expect = 6e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMK 193
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 5e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN PAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVL 142
Score = 102 bits (245), Expect = 2e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMK 193
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (439), Expect = 6e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVL 142
Score = 103 bits (247), Expect = 1e-22
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (439), Expect = 6e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVL 142
Score = 103 bits (247), Expect = 1e-22
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (439), Expect = 6e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVL 142
Score = 103 bits (247), Expect = 1e-22
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMK 193
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (438), Expect = 8e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN PAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVL 142
Score = 102 bits (245), Expect = 2e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMK 193
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 8e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN PAMYVAIQAVL
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVL 142
Score = 102 bits (245), Expect = 2e-22
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LM+
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMK 193
Score = 99 bits (238), Expect = 1e-21
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 162 bits (394), Expect = 2e-40
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFE+F P+MY+ IQAVL
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVL 143
Score = 101 bits (241), Expect = 6e-22
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 654
LY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL
Sbjct: 145 LYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYL 192
Score = 94.3 bits (224), Expect = 7e-20
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 154 bits (374), Expect = 5e-38
Identities = 66/89 (74%), Positives = 80/89 (89%)
Frame = +2
Query: 242 LLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 421
L ++A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 422 PKANREKMTQIMFETFNTPAMYVAIQAVL 508
PKA+REKMTQIMFETF P+MY+ +QA L
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAAL 97
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
L+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLM+
Sbjct: 99 LHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMK 148
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 152 bits (369), Expect = 2e-37
Identities = 71/98 (72%), Positives = 80/98 (81%)
Frame = +2
Query: 215 RDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 394
RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 395 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 508
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVL 131
Score = 93.9 bits (223), Expect = 9e-20
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL+E
Sbjct: 133 LYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIE 182
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVG 46
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 102 bits (245), Expect = 2e-22
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 460
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 461 ETFNTPAMYVAIQAVL 508
E +N +++ IQAVL
Sbjct: 126 EKYNFAGVFIQIQAVL 141
Score = 68.5 bits (160), Expect = 4e-12
Identities = 27/50 (54%), Positives = 39/50 (78%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL++
Sbjct: 143 LYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVD 192
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG 254
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVG 56
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 466
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 467 FNTPAMYVAIQAVL 508
FN P +Y+A+ +VL
Sbjct: 146 FNVPGLYIAVNSVL 159
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +1
Query: 532 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQ 215
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 194
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 448
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 449 QIMFETFNTPAMYVAIQAVL 508
++MFE + PA+++A VL
Sbjct: 145 ELMFEKYKVPALFMAKNPVL 164
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1
Query: 514 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
+A+GR T +V+D G G + P+++GY L A++ L G LTD L++
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLK 215
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 269 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 197
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 472
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 473 TPAMYVAIQAVL 508
Y + QAVL
Sbjct: 117 VSGFYASEQAVL 128
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 200
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 287 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 466
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 467 FNTPAMYVA 493
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 454 HVRNIQHARHVRRHPSRAPLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 633
H +++ H R P S +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSI---LSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 634 RDLTDYLME 660
+ T+YL E
Sbjct: 187 KAFTNYLKE 195
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 472
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 473 TPAMYVAIQA 502
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 660
L+ + GIVL G +H++P +G + R ++ G +TDYL +
Sbjct: 163 LHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQ 212
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 232 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 95
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 409 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAPLY 516
GSP+ +G + E+D D + NI+H + +H + A LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 613
T PV PP TP+ SPTP P + +PTPS
Sbjct: 94 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 613
T PV PP TP+ SPTP P + +PTPS
Sbjct: 112 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 613
T PV PP TP+ SPTP P + +PTPS
Sbjct: 130 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
T PV PP TP+ SPTP T SP P
Sbjct: 148 TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 527 VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTT 652
+PPV+ TP+ ++ P P + T +PT S T PVA+ T
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTSPT-TSPVASPPQT 78
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQT 649
T PV+ P + P PTP P +PTP V T P T T
Sbjct: 201 TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV-TPPTPTPPT 244
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW----T*PVATSQTTSWRILT 670
T PVV P + P PTP P +PTP + T PV T T + ++T
Sbjct: 171 TPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVVT 226
>At1g31850.3 68414.m03915 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = -2
Query: 634 DRLSPDAGWRGGVRILXXXXXXXXXXXRSPARYRWYDRTRTAEHGLDGDVHGGRVECFEH 455
D + PD+ W +R + +W +R A + GDVHGG +H
Sbjct: 372 DSIEPDSAWYTPLRPCVVAPTPKVKKSGLGSIPKWPERLHVAPERI-GDVHGGSANSLKH 430
Query: 454 D 452
D
Sbjct: 431 D 431
>At1g31850.2 68414.m03914 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = -2
Query: 634 DRLSPDAGWRGGVRILXXXXXXXXXXXRSPARYRWYDRTRTAEHGLDGDVHGGRVECFEH 455
D + PD+ W +R + +W +R A + GDVHGG +H
Sbjct: 372 DSIEPDSAWYTPLRPCVVAPTPKVKKSGLGSIPKWPERLHVAPERI-GDVHGGSANSLKH 430
Query: 454 D 452
D
Sbjct: 431 D 431
>At1g31850.1 68414.m03913 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = -2
Query: 634 DRLSPDAGWRGGVRILXXXXXXXXXXXRSPARYRWYDRTRTAEHGLDGDVHGGRVECFEH 455
D + PD+ W +R + +W +R A + GDVHGG +H
Sbjct: 372 DSIEPDSAWYTPLRPCVVAPTPKVKKSGLGSIPKWPERLHVAPERI-GDVHGGSANSLKH 430
Query: 454 D 452
D
Sbjct: 431 D 431
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 524 VVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 616
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 521 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
P PP S TP SP P P + SPTP
Sbjct: 230 PGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 530 PPVSCWTPATVSP-TPCPSTKDTHSPTPS 613
P S TP+T +P TP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 563 SPTPCPSTKDTHSPTPS 613
SPTP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPS 294
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTKDTHSPTP 610
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTKDTHSPTP 610
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 622
T P P PA V P P P + +P P +W
Sbjct: 92 TAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 599 SAYPS*MGTVWETPSPESSTIPVVRPDAYSGARLGW 492
+AYPS TV+ SP P + P +Y G+ +G+
Sbjct: 461 AAYPSPPTTVYSNRSPPYPYSPEIIPGSYQGSPIGY 496
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 613
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 613
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 281 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 442
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +1
Query: 370 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRAPLYASGRTTGIVLD 549
AC GT GSP+ +G + +DD D + + + H + A LY TG
Sbjct: 80 ACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFYGMD-PEHVTEAALYYMRLNTG---R 135
Query: 550 SGDGVSHTVPIYEGYALP 603
D VSH G +P
Sbjct: 136 GTDEVSHLYSASPGSEVP 153
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 476 PAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCP--STKDTHSPTPSCVWT*PVATS 643
P Y A+Q+ P PP + P T SP P P T SP P V+ PV S
Sbjct: 623 PPTYYAVQS------PPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQS 674
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPST---KDTHSPTPSCVWT*PVATS 643
PP ++P T SP P P T SP PS V+ PV S
Sbjct: 663 PPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQS 703
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/74 (27%), Positives = 28/74 (37%)
Frame = +2
Query: 392 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPT 571
P L+T+ P++PK Q +T A Q L P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 572 PCPSTKDTHSPTPS 613
P P+T + P+
Sbjct: 246 PSPTTAAKRNADPA 259
>At1g08520.1 68414.m00943 magnesium-chelatase subunit chlD,
chloroplast, putative / Mg-protoporphyrin IX chelatase,
putative (CHLD) similar to Mg-chelatase SP|O24133 from
Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum
sativum]
Length = 760
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 564 LPHRAHLRRIRTPPRHPASGLSRSRPHRLPHGGSSPSA 677
+P R + PP + ++R+R RLP GG SP A
Sbjct: 598 IPFRGDAAEVLLPPSRSIA-MARNRLERLPCGGGSPLA 634
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 507 SAVRVRSYHRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 623
S +SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 521 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
P PP SC TP+ P+P P K + P+P
Sbjct: 53 PSPPPPSC-TPSPPPPSPPPPKKSSCPPSP 81
>At4g11050.1 68417.m01796 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa]
Length = 626
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +2
Query: 548 TPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTSWR 661
+P + P P P K T P S ++ T SW+
Sbjct: 508 SPVIIKPAPVPQRKPTKPPAASSPSPITISQKMTNSWK 545
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 376 RPRGTPSPA--H*GSPQPQGQQRED-DPDHVRNIQHARHVRRHPSRAPLYASGRT 531
R R +PSP SP P ++R P + RN + RR+ SR+PL GR+
Sbjct: 367 RRRRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPSPLYRRNRSRSPLAKRGRS 421
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.5 bits (58), Expect = 8.9
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +2
Query: 308 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 481
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 482 MYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 607
I +L + +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDFSS--LPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 27.5 bits (58), Expect = 8.9
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +2
Query: 308 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 481
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 482 MYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 607
I +L + +PP+ P+ +S T P+ K + PT
Sbjct: 195 SLENIDHLLDFSS--LPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 208 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 86
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 464 TFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 607
T N P I T+PV PPV ++ T P+ P T SP+
Sbjct: 118 TVNEPPSAFTIGPYAHETQPVTPPV--FSAFTTEPSTAPFTPPPESPS 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,092,993
Number of Sequences: 28952
Number of extensions: 419399
Number of successful extensions: 1600
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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